Gene Ddes_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1394 
Symbol 
ID7285089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1669575 
End bp1670753 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content60% 
IMG OID643582202 
Productcell wall biogenesis glycosyltransferase-like protein 
Protein accessionYP_002479974 
Protein GI220904662 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00767867 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTGGC TCTGGTTTGC GCTGGCAGCT TTAAAATGCT TGTTACTCTA TGTTCTGGCC 
CGGACAGGTC AGGCCCTGCC GCGCCGGGCG CGGCTGGATG AGGCGGCCAA CCGTGCCTTG
CCCGACGACC GCTGGCCCGT GGTCGGCATG ATCGTGCCCA TGGCCGGTGC TGACAAGCGT
ATGTCCGCCG CTGTGCGCAG CCTGCTCCTT CAGAACTATC CCCGCTATTT GCCCGTGCTG
GTCACTGCCA CTGCTGATGA ACCGGCTGCG GACCTTGTGC GGCAGATCCA GCGGGACTAT
CCTCACGCGC GGCATGTGGT GGCCGGACCG GCCCGTAACT GCGGACAGAA AAACCACAAC
AGCCTTTGCG GGGTAGCTGC AGTCAAAAAC AAGGCCGATG TCTTTGTTTT CTGCGACAGC
ACCCATATGG CCCGGCCGGA TTTCATGCGG CATCTGGTGG GGCCGCTTGC CACTGGCGAG
GCCGAATTTT CTACAGGCTA TCATGTGGTG AATCCCACCG ACCACCGCCC CGTGACCCTG
GCGTATGCCC TGTGTGTTCT GCTTATGCGC CTTTTGCAGG CTGTTTCGTC TTTCACCCAG
CTTTGGGGCG GGGCCATGGC CATGACCCGC GAGGCATTCG GCAGATACGC AGTGGAAGAC
TTGTGGGCGC GCAACGTGGT GGATGACTGT TCGCTTTCGG CCCGTCTGCA AAAACTGGGA
ATTCCGGTGC GGCTTTGCCC CGGCGCGCTC CTGCATACCG AGGCCGGCAG GCATGAGCGC
CATGTCTGGC GGGCCTGGAT GGACCGGCAA GTGCTCTTCC TCAAGTTTTG CATGCCCATA
CAGTGGGTGC TTCTGGGCTT TATGGGCTTT GTCATGGCCG TGCCGCCCCT GGTCGCCGCC
TTCATTCTTT TGGGAGGACT GTTACATGTG AGCAGCGGCC TGGCTGTGAT GCTGGCGCTT
TTGTGGATAG TCATGCTGTC TGTGATCCTG CACTTGTGGC GAGGCCTGCT GCGGCATTCC
ATTTCATTTG TCCGCTGGTT CCTGAGCTTC TTTGATGCTG TAGCCATGTT TGTTCTGGTC
TACTTTCGCA GTCTGCCTGC ACGAAGCATT GTGTGGCATG GCCTGCGCTA CGTTGTGGGG
CGGGGCGGCA CTGTGCGGCG GGTGGAACGG CTTTTTTAG
 
Protein sequence
MFWLWFALAA LKCLLLYVLA RTGQALPRRA RLDEAANRAL PDDRWPVVGM IVPMAGADKR 
MSAAVRSLLL QNYPRYLPVL VTATADEPAA DLVRQIQRDY PHARHVVAGP ARNCGQKNHN
SLCGVAAVKN KADVFVFCDS THMARPDFMR HLVGPLATGE AEFSTGYHVV NPTDHRPVTL
AYALCVLLMR LLQAVSSFTQ LWGGAMAMTR EAFGRYAVED LWARNVVDDC SLSARLQKLG
IPVRLCPGAL LHTEAGRHER HVWRAWMDRQ VLFLKFCMPI QWVLLGFMGF VMAVPPLVAA
FILLGGLLHV SSGLAVMLAL LWIVMLSVIL HLWRGLLRHS ISFVRWFLSF FDAVAMFVLV
YFRSLPARSI VWHGLRYVVG RGGTVRRVER LF