| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1371 |
|---|
| Symbol | |
|---|
| ID | 7285065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 1644474 |
|---|
| End bp | 1645025 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643582178 |
|---|
| Product | microcompartments protein |
|---|
| Protein accession | YP_002479951 |
|---|
| Protein GI | 220904639 |
|---|
| COG category | [C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAC GTACTATCGG CTGCGTTGAA CTGAGCAGCA TCGGCATGGG CATTCAAACG
GCTGACGAAA TGGTCAAGGC CGCCAATGTG GAACTGGTCA TGGCCCGCCC CACCTGCCCC
GGCAGGTATC TTGTGATCAT CACCGGTGAC ACGGGCGCGG TGACAAGCTC TGTGCAGACC
GGCCTCACAC TGGGTGCGGA CCTTGTTGTG GACAGCTTCA TCATTCCCAA TGTGCATGAA
GATGTTATTC CCGCCATGAA CGGTACAGCC ATTCAGGGGC GTATCAACGC CCTTGGCGTG
ATTGAAACCT ACACGGCGGC CTCCTGTGTT CTGGCAGCTG ATGCCGCCGC AAAGGCTGGT
GATATACGCC TGCTGGAACT GCGCCTCTCT GCCGGACTTG GCGGCAAGGC TTTTGTAATC
ATGACCGGAG AAGTCAGTGC CGTGCAGTCC TCGGTGGATG CTGGCGTTGC CAACGTGACC
GAGGGCGGTC CCGTGGTCAG CAAGATTGTC ATCCCCTCCC CCAGTGAGGA TCTGAAAAAA
CAGTTGCTGT AG
|
|---|
| Protein sequence | MKLRTIGCVE LSSIGMGIQT ADEMVKAANV ELVMARPTCP GRYLVIITGD TGAVTSSVQT
GLTLGADLVV DSFIIPNVHE DVIPAMNGTA IQGRINALGV IETYTAASCV LAADAAAKAG
DIRLLELRLS AGLGGKAFVI MTGEVSAVQS SVDAGVANVT EGGPVVSKIV IPSPSEDLKK
QLL
|
|---|
| |