Gene Ddes_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1370 
Symbol 
ID7285064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1643137 
End bp1644462 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content60% 
IMG OID643582177 
ProductRespiratory-chain NADH dehydrogenase domain 51 kDa subunit 
Protein accessionYP_002479950 
Protein GI220904638 
COG category[C] Energy production and conversion 
COG ID[COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAG CAATTGTAGA CGCCATACGC CAGGCTGGCG TTGTAGGCGC TGGCGGGGCG 
GGACTGCCCA CCCATGTAAA GGCTGACGCC ACGGCGCAAA CTGTGCTGGT CAACGGCGCC
AGCTGCGAAC CCCTGCTCAT GAGCGACCCC TACCTTATGG AAGAGCAGGT AGACGTCATG
CTGCGCGGCC TTGAGGCCAT GATGGACTGT ACCGGCGCGA ACCGTGGTGT TGTCTGCCTT
AAGGGCAAAC ACGCCGCCGC CATGAAGAGT GTACGCGAAG CCGTGGCCCG ACGCGGGCAA
GGCCGCCTTG AAGCGTTTGA AATGGGCGAC TTCTACCCTG CCGGCGACGA ACAGGTTATG
GTTTACGAAG TGCTGGGCGG CATTGTACCC GAGCGCGGTA TACCGCTGCA GATCGGCGCT
GTGGTCAGCA ACGTGGAAAG CCTTTTCAAT ATTGCTCACG CGCTGGACGG CAAGCCTGTC
ACCCACCGTT ACCTTACGGT CGGTTGTGAA GTGGTCCGGC CCATGGTGGT GCGGGTACCT
GTAGGAACCC GTGTGGCCGA AGTGCTCAAT TTTGCCGGTG GAACCACCAT CAGCGAATAC
CGCGTGGTGG ACGGCGGTCC CATGATGGGC CGTGTGCTGC CCGATGCGGA CCAGCCGGTT
ACAAAAACCA CCAGCGGTCT GCTGGTACTG CCGCCGGACC ATAATGTGGT GAACCGCAAG
GTAATGGACC CGCATGTGGT CAAGCGCCTC ACAAACACCG TATGCTGTCA ATGCTCTCAA
TGCACGGACC TCTGCCCCCG CAACCTGCTC GGGCACAAGT TGCACCCGCA CAAGCTCATG
CGTGTTCTCG ACGGGCAGAC CATCAGCAAT CCTGTGGCGA AAGAGGCCCT GCTCTGCTCC
GAATGCGGCA TTTGTGAAAA GTTCGCCTGC CCTATGGGTC TTTCACCTCG TGAAGTCAAT
GCCATGCTCA AGCAGGAGCT TATGAAGGCA GGCATCAAAT GGGAATATGA CGGACGTCCC
CTTGCCACAT CCCGCTTTCG CGAGGAACGC CGCATCCCCA CAAGCCGCCT TGTGAGCCGT
CTCGGCCTGG CGGATTACGA GGCCCATCCC CCATTTGCCG GGGACTTTGA GCCGACAGAG
GTACGTATTC CGCTGAAGCA GCATATCGGC GCTCCCGCCC TGTCTGTGGT TTCTGTGGGC
CAGAGCGTCA ATGTGGGCGA TCTTATCGGC GAAATCCCCG AAGGGGCTAT GGGCGCACGC
GTACATGCCA GTATCAAAGG TACGGTCAGC GCGATTGAAA ACGGCATCAT CACCATCAAG
GCCTGA
 
Protein sequence
MGKAIVDAIR QAGVVGAGGA GLPTHVKADA TAQTVLVNGA SCEPLLMSDP YLMEEQVDVM 
LRGLEAMMDC TGANRGVVCL KGKHAAAMKS VREAVARRGQ GRLEAFEMGD FYPAGDEQVM
VYEVLGGIVP ERGIPLQIGA VVSNVESLFN IAHALDGKPV THRYLTVGCE VVRPMVVRVP
VGTRVAEVLN FAGGTTISEY RVVDGGPMMG RVLPDADQPV TKTTSGLLVL PPDHNVVNRK
VMDPHVVKRL TNTVCCQCSQ CTDLCPRNLL GHKLHPHKLM RVLDGQTISN PVAKEALLCS
ECGICEKFAC PMGLSPREVN AMLKQELMKA GIKWEYDGRP LATSRFREER RIPTSRLVSR
LGLADYEAHP PFAGDFEPTE VRIPLKQHIG APALSVVSVG QSVNVGDLIG EIPEGAMGAR
VHASIKGTVS AIENGIITIK A