Gene Ddes_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1366 
Symbol 
ID7285060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp1640249 
End bp1640797 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content61% 
IMG OID643582173 
Productmicrocompartments protein 
Protein accessionYP_002479946 
Protein GI220904634 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACTC TGGGCATTGT GGACAGCCGC AGCATAGCGG CCGGTGCTGA AATCACCGAT 
GCCATGCTCA AGGCCGCGCC TGTTACTCTG GTGCGGGCGT CGGTCATATG CGCCGGACGC
CTGCTCATCC TGGTCGAAGG CGACCGCGAA GCTGTGGAAA CTGCTCTTCG CGCCGCTGAA
GGTACTGGTT TTCATCTGGC CGGAAAATAT GCCATCTCGC CCGTGTCGCA GCAGGTACAG
GCAGCCCTGC GCCGCCAGCC CTCCCCTATG GGCGGCCGGG CCATGGCCGT TATTGAATGC
CGCAATGCCG CCGACGGTAT CATGGCGGCG GATACGGCCG TAAAAAAAGC CGATGTGAGC
CTTATGCGGC TGGTTATGGG GCAGGGCATC GGCGGCAAAT CCTACTTTGT GCTTACAGGC
GATGTGGCCG CCGTGCGTGA AGCCGCACAG GCCGCAGCCG ATGCGCTGGG CAAGAGCCTT
CAGCAAATGG TGGTCATTCC CCAGCCCGAT GCGGAACTTG TAAAGGCATT TACAGGAGCG
GCCCTGTAA
 
Protein sequence
MDTLGIVDSR SIAAGAEITD AMLKAAPVTL VRASVICAGR LLILVEGDRE AVETALRAAE 
GTGFHLAGKY AISPVSQQVQ AALRRQPSPM GGRAMAVIEC RNAADGIMAA DTAVKKADVS
LMRLVMGQGI GGKSYFVLTG DVAAVREAAQ AAADALGKSL QQMVVIPQPD AELVKAFTGA
AL