| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1335 |
|---|
| Symbol | |
|---|
| ID | 7285028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 1593847 |
|---|
| End bp | 1597161 |
|---|
| Gene Length | 3315 bp |
|---|
| Protein Length | 1104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643582141 |
|---|
| Product | amino acid adenylation domain protein |
|---|
| Protein accession | YP_002479915 |
|---|
| Protein GI | 220904603 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGA CTGCTGAACA GATGCAGCTC TTTGCCCGGT TGGCAAATAA AAAAGGCCTT
GCCAGACCGT CTCAAGAAAA AAATCCGGCA GACAGCGAAG CGCCGCTTGA ATTTCCAATG
ACCGATGTGC AGTGGGCCTA TTGGATTGGC CGCACGACAG GCGTCAAACT GAGCGGAGTG
GCAAGCCACG GGTATCAGGA ATTCGACTGC GGCGCGCTTG ATGTCGACCT GCTTCAGACC
TCCTGGGACA AGGTCATAGC CCGGCACGAC ATGCTGCGCG CCACGGTGAC TGGAGATGGC
GTGTTTCGTG TGCAGTCCGA GGTGCCACCT CTTCGCTGGG ATGTTGAAGA CCTGCGCGGG
CTGGGTGCGG AAGAAAAGAA GCATCGTCTG GAAGCCAGAC GGCAGGCTTT TTCACACCGT
ATTCCCGATC TTTCTGTATG GCCGGTGATC CTGCTTGGGG CCAGCATCGT TGCTGACGAT
TTCGTGCGGA TACACCTGAG CTGCGATGCC GTCATGGCAG ACGTATACAG TATTGGCAAT
TGTCTGCGGG AGCTGGGAGC ATTTTACTCT GACCCGCACT GCGAGCTGCC TGCCCCCGGT
ATGACTTTCG GGCAGTATAT GGAGGAACAG AAACGGAAAG AAAAGTCTGC GTTTTACGAA
AATTGCCGGG CGTACTGGCA TAGCCGTCTG GCGGATTTTC CGGCAGCGCC ACAGCTGCCG
GTACGGGAAA ATCCTCCGCA GGCCCAGCGC TTTTGCCGCC TGAGGGCCGG GCTGCAGCTG
GAAGAATGGG TGGCGTTCAA AGCCAAGTGC GCCCGGTATG CCCTGACTCC TTCAGTGGTT
CTTTATGCGG CCTTTGCGGC CATAATGGGA AAATGGGCGG CCAAGGCGGA ATTTTGCCTC
AATGTGACGG TTTTCAACAG GGATTCAGAA AACCCGGCTA TCAAGGATGT AGTGGGTGAC
TTTACTTCCA CGATGCTTTC AACCGCCAGA AAAATACGCC AGGAAGAAAA TTTTATTGAT
TACGCCAAAG CGCTTGACGC TGTATTCTGG CAAGATTTCG AACACAGCGC CTTTTCCGGC
ATAAAAGTTC TTCAGGCCCT ATCCGAACGT CGCAAGCATT CCGTCCTGAT GCCCATCGTG
TTTACCAGCA CTATTGGCGC GGGCGATGTG GGTGAAATAC TTGACATCAA CAATGGGGTG
TTCGGCAAAC CCGCGTATAC CATAACGCAG ACTCCCCAGA TATGGCTGGA CCATCAGGTT
CTTGAAGAAG ACGGAACACT GGTTTTCAAC TGGGACGTCG TTGAGGGCAT TTTTGATGAT
GCCGTGCTCA CCGACATGTT TGAAAGCTAC ACCAGATTTG TTGAAATCCT TGCACATCCG
GATACGGACT GGCAAAGGCC CGTTGAAATT CCCCTGCCGG AAGCACAGCA GGTGCGCCGT
AGCGCGCCAC CACCCTCGTT CCACCGGGAC GACAGGCTGC TGCACCACGG TTTTCTGGAT
CACGTTCTGG CCTCGCCGGA CAGGGTAGCC ATCATCGCGC CGGACCGCAC GTTGACTTAC
GGCGAACTTT TCACGGCTGC AAAGGATGTG GCCCGGCGTT TGAAAACAGT TTTGCCGCAA
GACGCCAAAG ACATGCTTGT GGCCGTGGCC CTGCCCAAAA GCTGGGAGCA GATAGCGGCG
GTTCTGGGCG TACTGCTCAC CGGCGCGGCG TATGTGCCCG TAGATCCGGC ATGGCCTCTT
GCCAGGCGCA TGGCCGTGCT GCAGCAGGGC GCCCGTGCGG TTGTGGCGGA TGCGCAGGCC
TTGCCCGCGG AATGGGCCGG TCTGCCGCTG GCAGCTGTCG GACCTGTTGG CAAGCCTGAG
CCAGCCAGCA GTGCGGACCT GATTTCATTG CAGCGTTTTT CTCCTGACAG GCTGGCCTAC
GTCATCTTTA CCTCCGGAAC CACAGGAACG CCCAAGGGCG TCATGATGAC GCACGAGGCA
GTGCAGAACA CCATTCACGA TATCAACGCA CGGTTCAGCC TTTCCTCTGA AGACAGCGTC
TTTGCGTTGT CGGCCCTTTC ATTCGACCTT TCCGTTTACG ATATTTTTGG TCTGCTTTCG
GTGGGTGGGC ATCTTGTGCT GCCGCACGAT GCGGAACTTC GCGACCCTTC CGCCTGGGTA
CGCCGCCTTA CCGTGCATCC AGTGACACTC TGGAATTCCG TGCCGACGCT CTGGCAGATG
CTTGTGGAGC ATGGCGAAAC ACCGCCGCGC ATGCCAAGGT TGGCCCTGCT TTCTGGCGAC
TGGGTGCCGG TTCGTCTGCC TCGGGAATCA GCCCGGTTTT CGCCGGGAAC AAAACTTGTG
AGCCTGGGCG GAGCCACAGA GGCGGCCATT TGGTCCATTG CCTATGAAAT GTCAGTCGAA
GACCCCCCGG CAGGCTGGAG ATCCATTCCC TATGGGCGCG CTCTGACCCA TCAGAGTGTC
GAGGCCCTGC ATGAAGATCT GACCCCTTGC CCGGATGACG TGGTTGGCGA GCTTTTTATC
GGTGGGCGGG GGCTGTCCCT TGGTTACCTG GGCGACGCAA CCCTGTCGGG TGAACGGTTC
ATCCCCCATC CTGTTACCGG CGAAAGGCTT TACCGCACAG GCGATATGGG CCGATGGCGA
AGCAACGGGC AGATTGAGTT TCTGGGCCGC AGGGATACGC AGGTCAAGAT CAACGGCCTG
CGCATCGAGC TTGGCGATGT TGAGGCGGCG CTGTCATCCC TTGCGGGCAT TGCAGCGGCG
GTTGCATCTG TGGTGCCGCT GGCTGGGGGG ATGGACGGTC TGGCAGCCTA TATCGTGCCG
CAGAATGCAG AGGTCCCGCC CCGGCCGGGG GAACTGCGCG AAGCCCTTCT GGCGAAACTG
CCTCATTATA TGGTGCCGCA ACGCTATGTA TTTCTTGAAA GTTTACCTCT CTCTGACAAT
GGAAAAGTGG ACCGTAAGCG GCTTCCTGTG CCGCGCTTTG AAGAAGCTGT GCCGGATGAA
ACAGGTTCGG AGCTTGAAGA GTGCATCCGC GCTGTTGTGG CACAGCACCT CGGCGTCTCG
TCCTTTGGAC TTGATGACAA GTTTTTTGAT CTTGGAGCCA CATCCCTTTT GATGGTGAAG
ATCCACCGCG GTCTCAATCA GGTTCTGCCT GATCAGATCG CTCTCATACA ACTCTTTGAA
GCGCCAAGCG TGCGGGCTTT GGCCCGTCTG ATCGCGAAAG AAGAAAATGA CGCGGCCGGC
AAAGGGCGCG GGCATGCGGA GAAGAGGTTG GCGGCACGGA GTTCGCGCCG GAACAGAACC
GGGAGAGAGA AATGA
|
|---|
| Protein sequence | MSMTAEQMQL FARLANKKGL ARPSQEKNPA DSEAPLEFPM TDVQWAYWIG RTTGVKLSGV
ASHGYQEFDC GALDVDLLQT SWDKVIARHD MLRATVTGDG VFRVQSEVPP LRWDVEDLRG
LGAEEKKHRL EARRQAFSHR IPDLSVWPVI LLGASIVADD FVRIHLSCDA VMADVYSIGN
CLRELGAFYS DPHCELPAPG MTFGQYMEEQ KRKEKSAFYE NCRAYWHSRL ADFPAAPQLP
VRENPPQAQR FCRLRAGLQL EEWVAFKAKC ARYALTPSVV LYAAFAAIMG KWAAKAEFCL
NVTVFNRDSE NPAIKDVVGD FTSTMLSTAR KIRQEENFID YAKALDAVFW QDFEHSAFSG
IKVLQALSER RKHSVLMPIV FTSTIGAGDV GEILDINNGV FGKPAYTITQ TPQIWLDHQV
LEEDGTLVFN WDVVEGIFDD AVLTDMFESY TRFVEILAHP DTDWQRPVEI PLPEAQQVRR
SAPPPSFHRD DRLLHHGFLD HVLASPDRVA IIAPDRTLTY GELFTAAKDV ARRLKTVLPQ
DAKDMLVAVA LPKSWEQIAA VLGVLLTGAA YVPVDPAWPL ARRMAVLQQG ARAVVADAQA
LPAEWAGLPL AAVGPVGKPE PASSADLISL QRFSPDRLAY VIFTSGTTGT PKGVMMTHEA
VQNTIHDINA RFSLSSEDSV FALSALSFDL SVYDIFGLLS VGGHLVLPHD AELRDPSAWV
RRLTVHPVTL WNSVPTLWQM LVEHGETPPR MPRLALLSGD WVPVRLPRES ARFSPGTKLV
SLGGATEAAI WSIAYEMSVE DPPAGWRSIP YGRALTHQSV EALHEDLTPC PDDVVGELFI
GGRGLSLGYL GDATLSGERF IPHPVTGERL YRTGDMGRWR SNGQIEFLGR RDTQVKINGL
RIELGDVEAA LSSLAGIAAA VASVVPLAGG MDGLAAYIVP QNAEVPPRPG ELREALLAKL
PHYMVPQRYV FLESLPLSDN GKVDRKRLPV PRFEEAVPDE TGSELEECIR AVVAQHLGVS
SFGLDDKFFD LGATSLLMVK IHRGLNQVLP DQIALIQLFE APSVRALARL IAKEENDAAG
KGRGHAEKRL AARSSRRNRT GREK
|
|---|
| |