| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_1273 |
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| Symbol | |
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| ID | 7284965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 1500528 |
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| End bp | 1501892 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643582079 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_002479854 |
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| Protein GI | 220904542 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.229003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAAA AATCTTATCA TATCATTACG TTCGGCTGCC AGATGAACGT GCACGACTCC
CAGTGGCTGG GCCGTGCCCT CACAGCTCGC GGGTTTGTTG AAGCTTCACT TGAAGATGCG
CAGGTGGTGG TTGTCAATAC CTGTTCCGTG CGTGAAAAAC CGGAACAAAA GGTCATGAGC
GCCCTTGGCC GCATCCGCCA CGTTACTGGC GGCAATCCCG ATGTGCTGGT AGGGGTCGCA
GGCTGCGTGG CGCAGCAATT GGGTGAAGGG TTTTTCAGCA AGGAAAGCCA GGTGCGCCTG
GTGGCGGGCA GCGACGGCAT AAGCGGTGCG CCTGCAGCAA TCGAACGCCT GCTGGAAGAG
CCGACCCTGC ACTTGTCATT GCTGGATTTC ACCAGCCACT ATATCGAACG CGAGGCCGGT
CCGGGAACAT CCGGATCCTC CTCAGGCCCG GTGGCCTTTG TCAACATCAT GCAAGGCTGC
GACAACTTTT GCGCGTATTG CATTGTTCCC TTTACCCGGG GACGCCAGAA ATCGCGCTCG
GCAGCCGCTA TCCTTGATGA ATGCCGCGCC GTGCTCGAGC GGGGCGCGCG CGAGATCACA
CTGCTGGGGC AGAATGTCAA TGCCTTCGGC CAGGATAAAA GCGGCGATGG AACAAGCTTT
GCACAGCTTT TACGCCAGGT GGCCGGTCTG CCCGGGCTTG AGCGCCTGCG CTATGTCACC
CCTCACCCCA AGGATATGGG GCCGGAAGAC GTAGCCGCTT TTGCGGAATT GCCCCAGCTA
TGCCCCCGTC TGCACCTTCC CCTGCAGGCC GGATCAGATG TGGTACTCAG GAGCATGCGC
CGCCGGTACG ACAGCGCGGC CTTCTTGCGC CTTGTGGACG ATCTGCGCGC CGCAAGGCCG
GACCTCGCCC TGTCCACTGA CCTGATTGTG GCTTTTCCCG GTGAAACGGA AGAAGACTTT
CAGGACACAC TTGCCATGAT GCGTGCCTGC AACTTCATGT CCAGCTTTTC TTTCATATAT
TCCGACAGGC CTGGAGCCAG AGCCGCGCTT TTTCCAGGTA AAATCGCTCC GGACGTGGCC
CAGGACAGGC TGCGGCGGCT TCAGGCCCTC CAGGACGACC TGGGAGCACG CTGGCTGGCG
GCCCGGGTTG AAAACAGGGA CAAGACAACC CTGCTCATGG AAGGCCCAAG CCCCAAACCG
GGCGAAAGTG CCGAACCAAG CTGGCAGGGG CGTGACCCGT ACGGAGTACC GGTGCATGTA
CCGTTGCCCG CCGGGGCTGA TCACACAGGT TTTCTGGTGC AAACCGTCAT TACAGAGGCC
AAGAAGCACA GCCTGCTGGC CGTGCGCACG GGGGAGCCAT GGTAG
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| Protein sequence | MIEKSYHIIT FGCQMNVHDS QWLGRALTAR GFVEASLEDA QVVVVNTCSV REKPEQKVMS
ALGRIRHVTG GNPDVLVGVA GCVAQQLGEG FFSKESQVRL VAGSDGISGA PAAIERLLEE
PTLHLSLLDF TSHYIEREAG PGTSGSSSGP VAFVNIMQGC DNFCAYCIVP FTRGRQKSRS
AAAILDECRA VLERGAREIT LLGQNVNAFG QDKSGDGTSF AQLLRQVAGL PGLERLRYVT
PHPKDMGPED VAAFAELPQL CPRLHLPLQA GSDVVLRSMR RRYDSAAFLR LVDDLRAARP
DLALSTDLIV AFPGETEEDF QDTLAMMRAC NFMSSFSFIY SDRPGARAAL FPGKIAPDVA
QDRLRRLQAL QDDLGARWLA ARVENRDKTT LLMEGPSPKP GESAEPSWQG RDPYGVPVHV
PLPAGADHTG FLVQTVITEA KKHSLLAVRT GEPW
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