Gene Ddes_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0888 
Symbol 
ID7284564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp1035974 
End bp1036645 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content58% 
IMG OID643581684 
Productprotein of unknown function UPF0153 
Protein accessionYP_002479473 
Protein GI220904161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCTG ACCTGACCGC TATTTTCACC CGCTACGAAA GCCTGCGGGC CGAGGCCGAC 
GCCCTGTTTG AACGGGTGCG CGACAGCTAT CCCCAGTGCG TGACCTGTAA GGAAGGCTGC 
AGCGACTGCT GCCACGCCAT GTTTGACCTT TCGCTGGTGG AAGCCATGTA TATCAACCGG 
GCCTTTAACG CCACTTTCGG GCATGGTCCC GAGCGCTCGG CCATACTGGA ACGCGCTTCA 
GAACTTGACC GCCACACCAC CCGTCTCAAG CGCGAACTGT ACAGGGCAGA AAAAGACGGC 
GAAAGCCCCG AAGATATCCT GAGCATCGCC GCCAAGGTCA AAATGCGCTG CCCTTTGCTG 
GACGACGCGG ACCGTTGCCT TCTTTATGAA GCACGGCCCG TCACCTGCCG CATTTATGGC 
GTGCCTACGG CTATCCGTGG TCAGGGCCAT GTTTGCGGTT TTTCCGCCTT TGAAAAAGGC 
AAGGCCTACC CCACCGTACA TATGGACAAA ATGTATGACA GGCTCGAAGG ACTGAGCAAG 
GACATCGCAA CCACGGTGCA GTCACGCTTC AAGGAACTGC ACGAGGTGTA TGTACCGCTG 
TCCATGGCCC TGCTGACCCG TTATGACGAA AGCTATCTCG GCATTGGGCC GGCCAAGAAA 
GAACAGGCCT GA
 
Protein sequence
MIPDLTAIFT RYESLRAEAD ALFERVRDSY PQCVTCKEGC SDCCHAMFDL SLVEAMYINR 
AFNATFGHGP ERSAILERAS ELDRHTTRLK RELYRAEKDG ESPEDILSIA AKVKMRCPLL 
DDADRCLLYE ARPVTCRIYG VPTAIRGQGH VCGFSAFEKG KAYPTVHMDK MYDRLEGLSK 
DIATTVQSRF KELHEVYVPL SMALLTRYDE SYLGIGPAKK EQA