Gene Ddes_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0852 
Symbol 
ID7284527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp996825 
End bp998411 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content59% 
IMG OID643581648 
Producthistidine kinase 
Protein accessionYP_002479437 
Protein GI220904125 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.152084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGACGT TCTTTAGAAA AAAACAGGCT CCGCCTCCTG ATGCCATTGC TACGGCAAGC 
GGGCAGGACG GCGCGGCGCA GGCCGGAAGC GGCCGCGGCA TGCCGTCGGG CAGCAGCCAG 
GATTGCGGCC AGACAGGCTC TACGGCCGGC TCCCGGGGTG ATGCCGGCGA GGGGTTGCCC 
CTGAGTTACG CCCGGCCCCT GTCCTGGCTT TCGCTGGTGA TTATTCTGCT CACCAGTCTG 
GTGCTTTCGT TCTTCATTTC CAATTCAGCC CGCGAAACCC TGCTGACCCG GCAGGAGGGT 
TTCGCCCGCC TGCTGGTGGA AAACCTCAAC AGCCAGATTT TCCGGCGCTT TGCCTTGCCC 
ACGCTTTTCG GCTACGGGCG CATTTCCTTG CGGCAGCCCG CCCAGTACGA CCGGCTGGAT 
CAGGTGGTGC AGTCCGTGAT TCACGGTCTG CCTGTGGAAC GTCTGCGCAT CTATGATTTT 
TCACGCATTG TGGCATATTC CACCCGCAAG GAAGAAATCG GCCGTGCCGG GCTTTCTCCG 
GCCAATCTGG ACGAGGTGTT GCACGGCGCG GCCCCCAAGT CTGAAATAAT TTCGACCATA 
CCGGCATGGC AGGCCCCTTT CAGGCTCCCG CTTGAAGAAG GAACCTTTGT TCTCCGTGTG 
CTGTACCCCT TGCGGGGTGA ATCGCTCAAG CCCGGTGAGG ATGCCCCCAT CATGGGCGCG 
CTGGAGCTTA CACAGGACAT TACGGGCGAC TATGAGCAGG TGGTGACGTT TCAGGGCATT 
ATTGTAATCA TGTGCCTCAT GTCTTCGGTG GTGCTTTTCG GCCTTTTGAT CATGCTTATC 
CACAGGTCGG AGCGTGTACT GGCCGAGCGG ATGAATAAAA ACCGCCAGCT CGAGAAGCAG 
CTTCACAGCA ACGAACGTTT TGTGAGCATG GGCCGCGTGA TCGCCAGTAT TGCCCACGAG 
ATCAGAAATC CTCTCGGCAT CATCCGCTCC AGCGCCGAGC TGCTGCAACG CCGCAGCGAT 
GCCGATGCAG GAACCCGGCG TATACTGGGA GCCATTTTTG ACGAATCTGT GCGCCTTTCA 
CAAACCGTAA ACGACTTTCT TGACTATGCC CGCCCCCGGC AACCCAAGCA GGACCTGGTT 
GATATAAGCC TTGTGCTGGA CCAGGTGCTG GGCTTTCTGG AGGGTGATAT GGGCCGCCGC 
AACGTGGCGC TGGAACGCAA TACTGAAGAG GGCCTTTTCG TTCATGGCGA CAAGGATTTG 
CTGTACCGCG CTTTTTACAA TATTCTGGTG AACGGACAAC AGGCAATGGA CGGCCCGGGC 
GTACTGCACA TCAGTGGAGT TCATGACGGC GAGGGGCATG TGCGGCTGGA GTTTCTCGAC 
TCCGGTCCCG GTTTTGACGC CTCCGTTCTG GCCAACCTGC TGGACCCCTT CTTTACGACC 
AAAGACGGGG GAACTGGCCT TGGCCTGCCC ATTGTGCAGT CCATTATCAC AAGCCACGGC 
GGCGTGATCC AACTGGAAAA CGGCCCGGAA GGCGGCGCTC TTGTACGTGT GCTGCTGCCC 
GAAGCCCATG CCGGGGTACA GGAATAG
 
Protein sequence
MWTFFRKKQA PPPDAIATAS GQDGAAQAGS GRGMPSGSSQ DCGQTGSTAG SRGDAGEGLP 
LSYARPLSWL SLVIILLTSL VLSFFISNSA RETLLTRQEG FARLLVENLN SQIFRRFALP 
TLFGYGRISL RQPAQYDRLD QVVQSVIHGL PVERLRIYDF SRIVAYSTRK EEIGRAGLSP 
ANLDEVLHGA APKSEIISTI PAWQAPFRLP LEEGTFVLRV LYPLRGESLK PGEDAPIMGA 
LELTQDITGD YEQVVTFQGI IVIMCLMSSV VLFGLLIMLI HRSERVLAER MNKNRQLEKQ 
LHSNERFVSM GRVIASIAHE IRNPLGIIRS SAELLQRRSD ADAGTRRILG AIFDESVRLS 
QTVNDFLDYA RPRQPKQDLV DISLVLDQVL GFLEGDMGRR NVALERNTEE GLFVHGDKDL 
LYRAFYNILV NGQQAMDGPG VLHISGVHDG EGHVRLEFLD SGPGFDASVL ANLLDPFFTT 
KDGGTGLGLP IVQSIITSHG GVIQLENGPE GGALVRVLLP EAHAGVQE