Gene Ddes_0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0829 
Symbol 
ID7284504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp973996 
End bp974793 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content61% 
IMG OID643581626 
Productformate dehydrogenase family accessory protein FdhD 
Protein accessionYP_002479415 
Protein GI220904103 
COG category[C] Energy production and conversion 
COG ID[COG1526] Uncharacterized protein required for formate dehydrogenase activity 
TIGRFAM ID[TIGR00129] formate dehydrogenase family accessory protein FdhD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0159111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGC CCGATCATCC CCCGGTCTGT TTTCCCATTA CCCTTACCCG CATCAACCGT 
CTGGGCAGAT ATGAAGTGGA CGACCTGCTC CTGCGCGAAG AAGCCTATAA TCTTACATGC
AACGGAAAAA CCGTAGCCTG CCTGCACTGC ATGCCCGACA AGCTTGAGGA ACTGGCCGTG
GGCAGGCTGT TTACCTTGGG GCTGCTGCAA GACGCCCGGC AGATACGTTC CCTGAGCATT
TTGCCCCCCG CGCCGTCCCG CACGCAGGCC GCCACAGACG CCAAAGGCAC GGCGGTCAAG
CTCCGTATGG CCGCTGCGCC CGATCAGCCC CCTGCGGGCA GCATGGCCGT GACCCTTGAT
CCCCCTCCTC CCTCTGTCCC CGCGCCTGAA GACGCCATAT GCCTTACTGC CGACAGGGTT
CACGAATTGC AGGCGGAATT TGAGGAGCAC TGCAATCTCT ACCGGCTTAC CGGGGCAGCC
CACAGTTGCG CACTGGCCGA CCCCTCCGGA GTTCTGCTTT TTTATGAAGA CATCGCCCGC
CATAACGCCC TGGACAAACT TATCGGGGCC ATGCTGCTGC GTGGCATCGG GCCGCAGGGC
AAACTCATGA TTTTCAGCGG CAGACTGGCG CTGGACATGC TGGAAAAGGC CGCAGCCTGT
GGTGTGCGCC TGCTGGTGGC CCCCGGCGCG CCCTCGCTGG CGGCAGTGGA ACTGGCAAGG
GCCGTCGACA TCTCCATTCT GGGTTTTGTG CGTCAGGGCA ATATCAATAT ATATACCTGT
CCGCACAGGA TTGTCTGA
 
Protein sequence
MSKPDHPPVC FPITLTRINR LGRYEVDDLL LREEAYNLTC NGKTVACLHC MPDKLEELAV 
GRLFTLGLLQ DARQIRSLSI LPPAPSRTQA ATDAKGTAVK LRMAAAPDQP PAGSMAVTLD
PPPPSVPAPE DAICLTADRV HELQAEFEEH CNLYRLTGAA HSCALADPSG VLLFYEDIAR
HNALDKLIGA MLLRGIGPQG KLMIFSGRLA LDMLEKAAAC GVRLLVAPGA PSLAAVELAR
AVDISILGFV RQGNINIYTC PHRIV