Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0827 |
Symbol | |
ID | 7284502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 969300 |
End bp | 972452 |
Gene Length | 3153 bp |
Protein Length | 1050 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643581624 |
Product | formate dehydrogenase, alpha subunit |
Protein accession | YP_002479413 |
Protein GI | 220904101 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.798346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCCACC ACAAGGAACC TCTCAGCCCG CGCACTGCCG TGTGCCACAG CAGATACCGC GACGCGGAAA AGCACCACGG CGTATGCCTT TATTGCGCCA TCGGATGCGG ACTGAACATA TATACATACC AGGGCGAAAT CGTCGGCGTG GAAGGCGATG ACGAAAGCCC CGTAAACCGG GGTCGCCTTT GTCCCAAGGG GTCAAACACC CTGCAAATGC TGCGCAGCCC TCACCGTGTC GCCACGGTGC GCTACCGCGC CCCTTATGCC ACCCAATGGG AAGACCGCCC GATGGACTGG GCCATGGACC GCATAGCCCG GCTCATGAAG GTCGCCCGTG ATGCCGGATT TCAGGAAAAG AACGCGGCCG GCATGCCCGT AAACACCTGC CACAGCATCG CCTCTCTCGG CGGCTCCGCC AGCGACAATG AAGAAAACTA CCTGATGAAA AAGCTCTTCA CCGGCGGTCT CGGCATGCTG GATGTCGAAA ACCAGGCCAG GCTCTGACAC TCCGCATCCG TGCCCGGTCT GGGCGCGTCA TTCGGTTTCG GCGCTTGCAC CAACTTTCCG CGCGACATGC GCAACAGCGA CTGCATCCTT GTCATGGGTT CCAACATGGC GGAATCCCAT CCTGTTGGTT TTCAATGGGT CATGGAAGCA AAAGAACGCG GCGCAACCCT CATCCACGTA GACCCGCGCT TTACCCGCAC CTCGGCCGTG GCCGACCATC ACATAAGCAT CAGGCCCGAT TCTGACCTGG CCTTTCTTGG CGCGCTTATC CATCTTATCC TGAAAAAAAA CGGCTGGTTT ACCGACTTTG TCAGCCATTA TACCAATGCC TCCACCCTGG TGAGCGAAAA GTTTTCCTTT GATGAAAACA CCGGCCTTTT CGTGGGCTTC AATCCGGCAA CACGCTCCTA CGACCAGGAT CCGGACGCCT GGGATTATGA GATGGACGAA CAGGGAATGC CCAAAAAAGA CCCGACCTTC CAGCATCCGC GCTGCGTTCT GCGCGTACTT GAAAAACAGT ACGCAGGCTA TACGCCAGAA AGAGCGGCTG AAACCTGCGG TTGCAGCCCC GAAGACGTGG AACTGGTAGC CGATCTGCTT ATGGGCAATT CCGGGCCGGA GCGTACTTCA GTCATGGCCT ATGCCCTGGG CTGGACACAG CACACCAGCG GCGTGCAGAT CATCCGGGCT GCGGGCATCA TCCAGTTGCT GCTCGGCAAC GTGGGGCGCC CGGGCAGCGG TATTGTCGCC CTGCGCGGGC ATGCCAACGT ACAGGGCGCC ACCGACATTC CCACCCTGTT CAACAATCTG CCCAACTACA TTCCGCAGCC CAAGGCCATT GCCGAACACG CCACCCTGAA AAACCTGCTG GAATACGGAC ACGGCCTGAG TGGCCGCAGA GGCAGGGAAG AAAGCGGCCT GTGGCGGCAA GAAGGCCTCA AGGGCGCATG GGCGGCCATG CCTTCCTACA TGGTCAGCCT GCTCAAGGCC TGGTACGGCG ATGCCGCCAC CGCAGACAAC GAGTATTGCT ATCAGAACCT GCCCAAAATG CAGAAGGACG AATCCGAACA GACGTTTTTC AAAGAAGCCC TGCAGGGTAC CGTGCGAGGC ATGTTTGTTT TCGGGCAAAA TCCGGCAGTG AGTTCACCCA ACTCCGGCTT TCACCGCGAA GCCATGCGCA AGCTGGACTG GCTTGTGGTG GTGGACGCTT TTGAAACAGA AAGCGCCGCC GTATGGTACG CCGACCCCGA CGGCCCCGGC CCGGAAACTG TGGGAACAGA GGTTTTTTTG CTGCCTGCCG CGCTGGCTAT GGAAAAAGGC GGCTCGGTTT CCAATACCGA ACGGCTGGTG CAGTGGCACG AACCTGTTCT GGACGCTCCG GGCGACAGCA GGTCCGACCT CTGGTATGTC TACCAGCTCG GCAAGCGTCT CAAGGCCCTT TACGCCGATT CCACCCAGGA GAAGGACAAG GCCCTGCAAC AGCTTACCTG GGACTATTGC AAACCCGGCG AAGACGAGCC GGACCCCGAA CTGGTACTGC GCGAAATGAA CGGATTCAAT ACCGTCACGG GCGAGCACCT CAAGGCTACG GGCCAGCTTG CCGCCGACGG CTCCACCGCC TGCGGTTGCC GCCTCTACTG TGGTGTCTAC CCCGCGCCGG GACAGAATCT TGCCAAACGG CGCGGCACCA TCGGTGATGA CGAAAACTTC TACCCCGACT GGGCCTGGGC CTGGCCGGGC AATTCGCGCA TCCTCTATAA CCGCGCTTCC GCCGACCCCG CGGGCAAGCC CTGGTCCGAG CGCAAGGCCA TCATCCACTG GGATGCCAAT GCCGGGCGCT GGAAAGGCGC GGACGTGCCC AACTATGTGC TCGACAAGGC TCCGGACTAC CGCCCAACGC CCGAAAGCAG GGGCATGAAC GCCATACCGG GCGATGCGCC CTTCACTGTG CATTTCGACG GCCTGGGCTG GCTGTTCGCG CCATTCGGCC TTTCCGACGG TCCCATGCCC GTACACTACG AGGCCCTGGA AACCCCTGTG CGCAACACCA TGGCTGCACA GCAGATATCC CCCTCGACCA CAACCATCGA AGACTCGCGC AATGCCATCG CCGCACAGGG CGATCCCCGC TATCCCGTCA TTCTCACAAG CTACCGGGTA ACGGAACAGT TTGTGGCAGG CGTTATGACG CGGCGCTCAA GCTGGATCAA CGAGCTTCAG CCCAGCCTGT TTTTTGAAAT GGACCCAGAA CTGGCCGCAA GCCTTGCCCT GCGCAATCTG GACTGGGTCA TTGCCGAAAG CAAACGTGGC TCCATTGAAG GCCGGGTGCT GGTCACCCCG CGCATACAGC CGCTCATGGT CTGCGGCAAC AAGGTGCACG TGGTGGGCGT ACCCATGCAT TTCGGCTACA AGGGCGAGGT GACGGGAGAC TCCGTCAACG TGCTCACGGC GCTGTCTCTC GGCCCCAATT CTGACATTGC CAGCGTCAAG TCCATTGCCT GCCGCATCAG GCCCGGCAGG CTCACGGCCC GCAGCGAACA CAAGGGCGAC TTCAAGGATG CCTACGCGCC TCTGCCCGAC GCTCCCATGA GCAAGGTCCC CTGGATATGC AAGCCCGAAG GGAGGCTCGA CTATGATAAC TGA
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Protein sequence | MLHHKEPLSP RTAVCHSRYR DAEKHHGVCL YCAIGCGLNI YTYQGEIVGV EGDDESPVNR GRLCPKGSNT LQMLRSPHRV ATVRYRAPYA TQWEDRPMDW AMDRIARLMK VARDAGFQEK NAAGMPVNTC HSIASLGGSA SDNEENYLMK KLFTGGLGML DVENQARLUH SASVPGLGAS FGFGACTNFP RDMRNSDCIL VMGSNMAESH PVGFQWVMEA KERGATLIHV DPRFTRTSAV ADHHISIRPD SDLAFLGALI HLILKKNGWF TDFVSHYTNA STLVSEKFSF DENTGLFVGF NPATRSYDQD PDAWDYEMDE QGMPKKDPTF QHPRCVLRVL EKQYAGYTPE RAAETCGCSP EDVELVADLL MGNSGPERTS VMAYALGWTQ HTSGVQIIRA AGIIQLLLGN VGRPGSGIVA LRGHANVQGA TDIPTLFNNL PNYIPQPKAI AEHATLKNLL EYGHGLSGRR GREESGLWRQ EGLKGAWAAM PSYMVSLLKA WYGDAATADN EYCYQNLPKM QKDESEQTFF KEALQGTVRG MFVFGQNPAV SSPNSGFHRE AMRKLDWLVV VDAFETESAA VWYADPDGPG PETVGTEVFL LPAALAMEKG GSVSNTERLV QWHEPVLDAP GDSRSDLWYV YQLGKRLKAL YADSTQEKDK ALQQLTWDYC KPGEDEPDPE LVLREMNGFN TVTGEHLKAT GQLAADGSTA CGCRLYCGVY PAPGQNLAKR RGTIGDDENF YPDWAWAWPG NSRILYNRAS ADPAGKPWSE RKAIIHWDAN AGRWKGADVP NYVLDKAPDY RPTPESRGMN AIPGDAPFTV HFDGLGWLFA PFGLSDGPMP VHYEALETPV RNTMAAQQIS PSTTTIEDSR NAIAAQGDPR YPVILTSYRV TEQFVAGVMT RRSSWINELQ PSLFFEMDPE LAASLALRNL DWVIAESKRG SIEGRVLVTP RIQPLMVCGN KVHVVGVPMH FGYKGEVTGD SVNVLTALSL GPNSDIASVK SIACRIRPGR LTARSEHKGD FKDAYAPLPD APMSKVPWIC KPEGRLDYDN
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