| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0827 |
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| Symbol | |
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| ID | 7284502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 969300 |
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| End bp | 972452 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643581624 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002479413 |
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| Protein GI | 220904101 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.798346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCACC ACAAGGAACC TCTCAGCCCG CGCACTGCCG TGTGCCACAG CAGATACCGC
GACGCGGAAA AGCACCACGG CGTATGCCTT TATTGCGCCA TCGGATGCGG ACTGAACATA
TATACATACC AGGGCGAAAT CGTCGGCGTG GAAGGCGATG ACGAAAGCCC CGTAAACCGG
GGTCGCCTTT GTCCCAAGGG GTCAAACACC CTGCAAATGC TGCGCAGCCC TCACCGTGTC
GCCACGGTGC GCTACCGCGC CCCTTATGCC ACCCAATGGG AAGACCGCCC GATGGACTGG
GCCATGGACC GCATAGCCCG GCTCATGAAG GTCGCCCGTG ATGCCGGATT TCAGGAAAAG
AACGCGGCCG GCATGCCCGT AAACACCTGC CACAGCATCG CCTCTCTCGG CGGCTCCGCC
AGCGACAATG AAGAAAACTA CCTGATGAAA AAGCTCTTCA CCGGCGGTCT CGGCATGCTG
GATGTCGAAA ACCAGGCCAG GCTCTGACAC TCCGCATCCG TGCCCGGTCT GGGCGCGTCA
TTCGGTTTCG GCGCTTGCAC CAACTTTCCG CGCGACATGC GCAACAGCGA CTGCATCCTT
GTCATGGGTT CCAACATGGC GGAATCCCAT CCTGTTGGTT TTCAATGGGT CATGGAAGCA
AAAGAACGCG GCGCAACCCT CATCCACGTA GACCCGCGCT TTACCCGCAC CTCGGCCGTG
GCCGACCATC ACATAAGCAT CAGGCCCGAT TCTGACCTGG CCTTTCTTGG CGCGCTTATC
CATCTTATCC TGAAAAAAAA CGGCTGGTTT ACCGACTTTG TCAGCCATTA TACCAATGCC
TCCACCCTGG TGAGCGAAAA GTTTTCCTTT GATGAAAACA CCGGCCTTTT CGTGGGCTTC
AATCCGGCAA CACGCTCCTA CGACCAGGAT CCGGACGCCT GGGATTATGA GATGGACGAA
CAGGGAATGC CCAAAAAAGA CCCGACCTTC CAGCATCCGC GCTGCGTTCT GCGCGTACTT
GAAAAACAGT ACGCAGGCTA TACGCCAGAA AGAGCGGCTG AAACCTGCGG TTGCAGCCCC
GAAGACGTGG AACTGGTAGC CGATCTGCTT ATGGGCAATT CCGGGCCGGA GCGTACTTCA
GTCATGGCCT ATGCCCTGGG CTGGACACAG CACACCAGCG GCGTGCAGAT CATCCGGGCT
GCGGGCATCA TCCAGTTGCT GCTCGGCAAC GTGGGGCGCC CGGGCAGCGG TATTGTCGCC
CTGCGCGGGC ATGCCAACGT ACAGGGCGCC ACCGACATTC CCACCCTGTT CAACAATCTG
CCCAACTACA TTCCGCAGCC CAAGGCCATT GCCGAACACG CCACCCTGAA AAACCTGCTG
GAATACGGAC ACGGCCTGAG TGGCCGCAGA GGCAGGGAAG AAAGCGGCCT GTGGCGGCAA
GAAGGCCTCA AGGGCGCATG GGCGGCCATG CCTTCCTACA TGGTCAGCCT GCTCAAGGCC
TGGTACGGCG ATGCCGCCAC CGCAGACAAC GAGTATTGCT ATCAGAACCT GCCCAAAATG
CAGAAGGACG AATCCGAACA GACGTTTTTC AAAGAAGCCC TGCAGGGTAC CGTGCGAGGC
ATGTTTGTTT TCGGGCAAAA TCCGGCAGTG AGTTCACCCA ACTCCGGCTT TCACCGCGAA
GCCATGCGCA AGCTGGACTG GCTTGTGGTG GTGGACGCTT TTGAAACAGA AAGCGCCGCC
GTATGGTACG CCGACCCCGA CGGCCCCGGC CCGGAAACTG TGGGAACAGA GGTTTTTTTG
CTGCCTGCCG CGCTGGCTAT GGAAAAAGGC GGCTCGGTTT CCAATACCGA ACGGCTGGTG
CAGTGGCACG AACCTGTTCT GGACGCTCCG GGCGACAGCA GGTCCGACCT CTGGTATGTC
TACCAGCTCG GCAAGCGTCT CAAGGCCCTT TACGCCGATT CCACCCAGGA GAAGGACAAG
GCCCTGCAAC AGCTTACCTG GGACTATTGC AAACCCGGCG AAGACGAGCC GGACCCCGAA
CTGGTACTGC GCGAAATGAA CGGATTCAAT ACCGTCACGG GCGAGCACCT CAAGGCTACG
GGCCAGCTTG CCGCCGACGG CTCCACCGCC TGCGGTTGCC GCCTCTACTG TGGTGTCTAC
CCCGCGCCGG GACAGAATCT TGCCAAACGG CGCGGCACCA TCGGTGATGA CGAAAACTTC
TACCCCGACT GGGCCTGGGC CTGGCCGGGC AATTCGCGCA TCCTCTATAA CCGCGCTTCC
GCCGACCCCG CGGGCAAGCC CTGGTCCGAG CGCAAGGCCA TCATCCACTG GGATGCCAAT
GCCGGGCGCT GGAAAGGCGC GGACGTGCCC AACTATGTGC TCGACAAGGC TCCGGACTAC
CGCCCAACGC CCGAAAGCAG GGGCATGAAC GCCATACCGG GCGATGCGCC CTTCACTGTG
CATTTCGACG GCCTGGGCTG GCTGTTCGCG CCATTCGGCC TTTCCGACGG TCCCATGCCC
GTACACTACG AGGCCCTGGA AACCCCTGTG CGCAACACCA TGGCTGCACA GCAGATATCC
CCCTCGACCA CAACCATCGA AGACTCGCGC AATGCCATCG CCGCACAGGG CGATCCCCGC
TATCCCGTCA TTCTCACAAG CTACCGGGTA ACGGAACAGT TTGTGGCAGG CGTTATGACG
CGGCGCTCAA GCTGGATCAA CGAGCTTCAG CCCAGCCTGT TTTTTGAAAT GGACCCAGAA
CTGGCCGCAA GCCTTGCCCT GCGCAATCTG GACTGGGTCA TTGCCGAAAG CAAACGTGGC
TCCATTGAAG GCCGGGTGCT GGTCACCCCG CGCATACAGC CGCTCATGGT CTGCGGCAAC
AAGGTGCACG TGGTGGGCGT ACCCATGCAT TTCGGCTACA AGGGCGAGGT GACGGGAGAC
TCCGTCAACG TGCTCACGGC GCTGTCTCTC GGCCCCAATT CTGACATTGC CAGCGTCAAG
TCCATTGCCT GCCGCATCAG GCCCGGCAGG CTCACGGCCC GCAGCGAACA CAAGGGCGAC
TTCAAGGATG CCTACGCGCC TCTGCCCGAC GCTCCCATGA GCAAGGTCCC CTGGATATGC
AAGCCCGAAG GGAGGCTCGA CTATGATAAC TGA
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| Protein sequence | MLHHKEPLSP RTAVCHSRYR DAEKHHGVCL YCAIGCGLNI YTYQGEIVGV EGDDESPVNR
GRLCPKGSNT LQMLRSPHRV ATVRYRAPYA TQWEDRPMDW AMDRIARLMK VARDAGFQEK
NAAGMPVNTC HSIASLGGSA SDNEENYLMK KLFTGGLGML DVENQARLUH SASVPGLGAS
FGFGACTNFP RDMRNSDCIL VMGSNMAESH PVGFQWVMEA KERGATLIHV DPRFTRTSAV
ADHHISIRPD SDLAFLGALI HLILKKNGWF TDFVSHYTNA STLVSEKFSF DENTGLFVGF
NPATRSYDQD PDAWDYEMDE QGMPKKDPTF QHPRCVLRVL EKQYAGYTPE RAAETCGCSP
EDVELVADLL MGNSGPERTS VMAYALGWTQ HTSGVQIIRA AGIIQLLLGN VGRPGSGIVA
LRGHANVQGA TDIPTLFNNL PNYIPQPKAI AEHATLKNLL EYGHGLSGRR GREESGLWRQ
EGLKGAWAAM PSYMVSLLKA WYGDAATADN EYCYQNLPKM QKDESEQTFF KEALQGTVRG
MFVFGQNPAV SSPNSGFHRE AMRKLDWLVV VDAFETESAA VWYADPDGPG PETVGTEVFL
LPAALAMEKG GSVSNTERLV QWHEPVLDAP GDSRSDLWYV YQLGKRLKAL YADSTQEKDK
ALQQLTWDYC KPGEDEPDPE LVLREMNGFN TVTGEHLKAT GQLAADGSTA CGCRLYCGVY
PAPGQNLAKR RGTIGDDENF YPDWAWAWPG NSRILYNRAS ADPAGKPWSE RKAIIHWDAN
AGRWKGADVP NYVLDKAPDY RPTPESRGMN AIPGDAPFTV HFDGLGWLFA PFGLSDGPMP
VHYEALETPV RNTMAAQQIS PSTTTIEDSR NAIAAQGDPR YPVILTSYRV TEQFVAGVMT
RRSSWINELQ PSLFFEMDPE LAASLALRNL DWVIAESKRG SIEGRVLVTP RIQPLMVCGN
KVHVVGVPMH FGYKGEVTGD SVNVLTALSL GPNSDIASVK SIACRIRPGR LTARSEHKGD
FKDAYAPLPD APMSKVPWIC KPEGRLDYDN
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