| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0738 |
|---|
| Symbol | |
|---|
| ID | 7284412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 871020 |
|---|
| End bp | 871724 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643581534 |
|---|
| Product | protein of unknown function UPF0005 |
|---|
| Protein accession | YP_002479324 |
|---|
| Protein GI | 220904012 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000107382 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATC CCCGCAGTGT AGCGCATAGT GGCGTAAGCA GCGTTACTTC CCTTTACATG
CGCCAGGTTT ACCAGTGGAT GACGCTGGGC CTGGGCATCA CCACGGTTAT GGCCTGGTTT
GTTGCCAGCA CGCCCGCAGT ACAGCAGGTC ATCTTCGGCA ATTCGCTGAT CATGATCGGC
CTCATCGTGG CGCAGTTCGG CCTTGTCATC GCCATTTCCG CCGCAGTGCA CAAAATGTCC
GGCAGCACGG CCACAGGGCT GTTTCTGCTG TATTCCGCGC TGACGGGGGC AACACTGTCG
TCCATCTTTG TGGTCTACCC CGTTGCCTCC ATCACCAACG CCTTTCTGGT TACCACCGGA
ACCTTCCTGG CCATGACCGT TTACGGCACC GTGACCAAGC GCGACCTCAC GGCCATGGGC
AGCTTTCTGT TCATGGGCCT GATCGGCATC ATTATCGCCA TGGTGGTCAA TATCTTCCTC
AAGAGCGCCA TGATGGACTT TGTGGTGAGC TGCCTTGGTG TGCTTATCTT TACCGGCCTT
ACGGCCTATG ACACCCAGAA GCTGCGCCGG TTCGGCGAAA GCGCCCCTCT GGACGACGCC
ACGGCCCTGC GCCGCGGAGC CATTTTGGGC GCGCTGACCC TGTATCTGGA CTTTATCAAT
CTTTTCCTCA TGCTGCTGCG CCTTTTTGGC GGCAACCGCA ACTGA
|
|---|
| Protein sequence | MTNPRSVAHS GVSSVTSLYM RQVYQWMTLG LGITTVMAWF VASTPAVQQV IFGNSLIMIG
LIVAQFGLVI AISAAVHKMS GSTATGLFLL YSALTGATLS SIFVVYPVAS ITNAFLVTTG
TFLAMTVYGT VTKRDLTAMG SFLFMGLIGI IIAMVVNIFL KSAMMDFVVS CLGVLIFTGL
TAYDTQKLRR FGESAPLDDA TALRRGAILG ALTLYLDFIN LFLMLLRLFG GNRN
|
|---|
| |