| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0699 |
|---|
| Symbol | |
|---|
| ID | 7284373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 829640 |
|---|
| End bp | 830449 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643581495 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_002479285 |
|---|
| Protein GI | 220903973 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.503674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACTC CTCCCAATAT CCTGACAATC GCCGGTTCCG ATTCCGGCGG CGGCGCGGGC
ATTCAGGCCG ACCTGAAAAC CATTATGGCC TTGGGCGGCT ACGGCATGAG TGTCATCGCC
GCGCTCACTG CCCAGAACGG TCAGGGCGTC ACGGGCATAC ACGCCCCGGA CCCGGACTTT
GTAGCCCTGC AGCTCTGCAC CGTGCTTGAC GGTTTTCCTG TAGCGGCCGC GAAAACAGGC
ATGCTGTTTT CAGCCCCCAT CATCAAGGCC ATTGCCCCCA TACTGCGCAA GCGCGACTTT
CCGCTTGTGG TAGACCCGGT TTCCATAAGC CAGAGCGGCA GCGTTCTTCT GCAGGAAGAC
GCGGTAAAAG CACTTGTACA GGAAATCCTG CCCGGCTGCG ATCTGCTGAC GCCCAACAGG
CCCGAAGCGG AAATGCTCAC CAACATGACC ATTGATAATC TTGACGACGC GGCGGCGGCC
GGTGAAAAAC TGCTGCAAAT GGGCGCACGG GCCGTTCTTA TCAAGGGCGG TCATATGGAA
AGCAATGTGG TTGTCACCGA CTGCCTGTGC ATGGAGGGAC AAGCTCCCAA ACACCTGCCG
CAGGCCAAGG TAGAAACCGT CAACAACCAC GGCACGGGCT GCACCCTTTC CGCCGCCATT
GCCACCGGCC TTGGCAAGGG GCTGCCCCTG CAGGTGGCGG TAACCCGCGC ACAGGAGTTT
CTCAATCTTG CCCTGCGCCG CAGCTACAGC CCCGGCAACG GATGCGGTCC TGTCAATCAC
TCGGCCGGGT TGAACCTTCA GGGTATTTAA
|
|---|
| Protein sequence | MQTPPNILTI AGSDSGGGAG IQADLKTIMA LGGYGMSVIA ALTAQNGQGV TGIHAPDPDF
VALQLCTVLD GFPVAAAKTG MLFSAPIIKA IAPILRKRDF PLVVDPVSIS QSGSVLLQED
AVKALVQEIL PGCDLLTPNR PEAEMLTNMT IDNLDDAAAA GEKLLQMGAR AVLIKGGHME
SNVVVTDCLC MEGQAPKHLP QAKVETVNNH GTGCTLSAAI ATGLGKGLPL QVAVTRAQEF
LNLALRRSYS PGNGCGPVNH SAGLNLQGI
|
|---|
| |