Gene Ddes_0589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0589 
Symbol 
ID7284261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp714067 
End bp714810 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content56% 
IMG OID643581384 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002479176 
Protein GI220903864 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0251025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGTC GTTTTGCTTT CGCCCTGCTG GTTCTGACCC TGTTTTGCGG TCAGGCTTTG 
GCCGCTGAAA AATATGTTGT GGCTACCGAC TGCACCTGGC CGCCTATGGA GCTTCTTGAT
GAAAACAAGC AGCCCGTCGG CTTTGACGTG GATTTTATTA CTGAAGTGGG CAAGGCCGCC
GGTTTTGAGG TGGACGTGCG CAATATCGCG TGGGACGGTA TTTTTGGCGG CGTAGCCACC
GGCCAGTATG ATATTGTGGC TGCTGCCACA ACCATCACGC CCGAGCGCCA GAAGCAGTTT
GATTTTTCCG ATCCCTACTA TGAGGTGGCC CAGGCTGTGG TGCTGCCTGC GGGGCAGAAC
ATAAAGAGCC TTGACGACCT CAAGGGCAAA AAAGTGGGCG GCCAGATCGG CACCACCGGC
GTTTTTGTTA TCCGTAAGTC CGGTGTGCCT GTGGATCTCA AGGAATATGA CGACGTGGGC
CTGGCTATCC AGGACATGCT CGGCGGCCGC ATTGACGCCG TGATCTGCGA CGAGCCTGTG
GCCATGTATT ACGCTAACAA AAAGGCCGAC ACTGCCGGCA AGCTGAACCT TTCGTTCAAG
ACCGCCGAAA AGGAATACTA CGGCTTTACC GTGCGCAAGG GCCGTACGGA CCTGGTGGAA
AAACTCAACA AGGGTATCAA GGCCGTCAAG GCTTCGGGCG TAGAGGCCGA GCTGCTTGAG
AAGTGGATGG GCAAGGCCGA CTAA
 
Protein sequence
MIRRFAFALL VLTLFCGQAL AAEKYVVATD CTWPPMELLD ENKQPVGFDV DFITEVGKAA 
GFEVDVRNIA WDGIFGGVAT GQYDIVAAAT TITPERQKQF DFSDPYYEVA QAVVLPAGQN
IKSLDDLKGK KVGGQIGTTG VFVIRKSGVP VDLKEYDDVG LAIQDMLGGR IDAVICDEPV
AMYYANKKAD TAGKLNLSFK TAEKEYYGFT VRKGRTDLVE KLNKGIKAVK ASGVEAELLE
KWMGKAD