Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0589 |
Symbol | |
ID | 7284261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 714067 |
End bp | 714810 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643581384 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_002479176 |
Protein GI | 220903864 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0251025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACGTC GTTTTGCTTT CGCCCTGCTG GTTCTGACCC TGTTTTGCGG TCAGGCTTTG GCCGCTGAAA AATATGTTGT GGCTACCGAC TGCACCTGGC CGCCTATGGA GCTTCTTGAT GAAAACAAGC AGCCCGTCGG CTTTGACGTG GATTTTATTA CTGAAGTGGG CAAGGCCGCC GGTTTTGAGG TGGACGTGCG CAATATCGCG TGGGACGGTA TTTTTGGCGG CGTAGCCACC GGCCAGTATG ATATTGTGGC TGCTGCCACA ACCATCACGC CCGAGCGCCA GAAGCAGTTT GATTTTTCCG ATCCCTACTA TGAGGTGGCC CAGGCTGTGG TGCTGCCTGC GGGGCAGAAC ATAAAGAGCC TTGACGACCT CAAGGGCAAA AAAGTGGGCG GCCAGATCGG CACCACCGGC GTTTTTGTTA TCCGTAAGTC CGGTGTGCCT GTGGATCTCA AGGAATATGA CGACGTGGGC CTGGCTATCC AGGACATGCT CGGCGGCCGC ATTGACGCCG TGATCTGCGA CGAGCCTGTG GCCATGTATT ACGCTAACAA AAAGGCCGAC ACTGCCGGCA AGCTGAACCT TTCGTTCAAG ACCGCCGAAA AGGAATACTA CGGCTTTACC GTGCGCAAGG GCCGTACGGA CCTGGTGGAA AAACTCAACA AGGGTATCAA GGCCGTCAAG GCTTCGGGCG TAGAGGCCGA GCTGCTTGAG AAGTGGATGG GCAAGGCCGA CTAA
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Protein sequence | MIRRFAFALL VLTLFCGQAL AAEKYVVATD CTWPPMELLD ENKQPVGFDV DFITEVGKAA GFEVDVRNIA WDGIFGGVAT GQYDIVAAAT TITPERQKQF DFSDPYYEVA QAVVLPAGQN IKSLDDLKGK KVGGQIGTTG VFVIRKSGVP VDLKEYDDVG LAIQDMLGGR IDAVICDEPV AMYYANKKAD TAGKLNLSFK TAEKEYYGFT VRKGRTDLVE KLNKGIKAVK ASGVEAELLE KWMGKAD
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