Gene Ddes_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0556 
Symbol 
ID7284224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp672535 
End bp673194 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content57% 
IMG OID643581348 
Productformate dehydrogenase, beta subunit, putative 
Protein accessionYP_002479144 
Protein GI220903832 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAAA CATTCTTAGT TGACACCACG CGGTGCACGG CATGTCGTGG CTGCCAGTTG 
GCCTGTAAGG AGTGGCATGA TCTGCCTGCC AACCACACCA AGCAGCGCGG CACGCACCAG 
AATCCGCCGG ATCTGAATCC CAACAACCTC AAGATTGTAC GCTTTCACGA ATATATCAAT 
GACGAAGGCA ATGTGGTCTG GAACTTCTTT CCCGACCAGT GCCGCCATTG CCTCACGCCG 
CCCTGTGTGG ATGTGGCAGA CATGGCGGTG CCGGGAGCCA TGATACAGGA CAAGAAAACA 
GGGGCCGTAC TGGCTACGGA AAAATCGGCC AAGCTCAGCG AGGACGACGC CCAGGCCATA 
CAGGAGGCCT GCCCCTATAA TATTCCCAGG CGCGATCCCG AAAACGGCCG CCTGACCAAG 
TGCGATATGT GCATCGACCG TGTCAGCGCG GGTATGCAGC CTATCTGCGT CAAGACCTGC 
CCGACAGGGG CCATGGTTTT CGGCGAGCGT GAAGAGGTGC TGCCCCTGGC CCAGAAACGT 
CTTGAAAACG CCAAAAAGCG TTGGCCCAAG GCTTTTCTGG CCGATATGGA AGATGTCAGC 
GTGATCTACC TGCTGGCCGA CACCAAGGAT AAGTATTACG AGTTCGCGGC CTTTATGTAG
 
Protein sequence
MPKTFLVDTT RCTACRGCQL ACKEWHDLPA NHTKQRGTHQ NPPDLNPNNL KIVRFHEYIN 
DEGNVVWNFF PDQCRHCLTP PCVDVADMAV PGAMIQDKKT GAVLATEKSA KLSEDDAQAI 
QEACPYNIPR RDPENGRLTK CDMCIDRVSA GMQPICVKTC PTGAMVFGER EEVLPLAQKR 
LENAKKRWPK AFLADMEDVS VIYLLADTKD KYYEFAAFM