Gene Ddes_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0552 
Symbol 
ID7284220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp665647 
End bp666135 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content59% 
IMG OID643581344 
ProductColicin V production protein 
Protein accessionYP_002479140 
Protein GI220903828 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCAGG ATATTTTTGA CCTCATTGTT GTTCTGACGC TGGTGTTTTT TGCCGGGCGT 
GGATATTTGC ACGGCTTTGT TGGTGAAGTT GCCGGCATAG TATCGCTTTT GGGCGGCTTT
TGGACGGCCC ACAACTACCA CGACAGGCTT TCACCCCACC TGACGCTCAT CACAGACCCC
GGCTGGCGCA CCGTGGCCGC CTACGTGCTG GTCTTTCTCG GTGTGCTTGT GTCCGTGGCG
CTTATTGCAC GGCTGCTGCA AAAGATCCTT TCCTTTTCCT TCGTCACCTG GGCCGACAGG
ATGGCCGGAG CCATGCTGGG CCTTGCCAAG GGCGCCCTGC TATGGTCCCT GGGCATGCTG
TTGCTGCAAA AATTCTTTTC TCAGGCGGCC TTTATGCAGC ACAGCCGCGT GCTGCCCTAT
TTTAACGCTC TCACGGCGCA GGTCCGCGGC TGGCTGCCGC CCGATCTGGT GTCGCGCCTG
GGCCTCTAG
 
Protein sequence
MGQDIFDLIV VLTLVFFAGR GYLHGFVGEV AGIVSLLGGF WTAHNYHDRL SPHLTLITDP 
GWRTVAAYVL VFLGVLVSVA LIARLLQKIL SFSFVTWADR MAGAMLGLAK GALLWSLGML
LLQKFFSQAA FMQHSRVLPY FNALTAQVRG WLPPDLVSRL GL