| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0421 |
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| Symbol | |
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| ID | 7284085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | - |
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| Start bp | 511632 |
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| End bp | 513356 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643581211 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002479011 |
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| Protein GI | 220903699 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGGA TCGCACCAAC CATATTCTTT TTGGGCATCA TCTTCACGCT GCCGTCAGCA
CAGCCGTTTG CCGACAAAGC CTTTGCCCGT CAGGCGGACC TGTCGCTCCC CATGCGGCGG
CAGGTTGCCT CATTTTTCCC TGCCGGCACC CTCCGCACAC TGCAAAGCAC CGGGCCGTCC
ACCTTCAATC TGCACATGGC TGGCAACAGC ACCACTGCTT CAGGCACAAC AGGAGAAACC
GCGGCAAGGC CTGACGCCGA TCCGGCAGAC GAGGCAGCCG GAGCAGCGGA TCAGGATGAA
CCGTTGTTAT TTCATCAGAA CAAACCTGTT ATCTTTCTTG CGGTGACGAT ACTTGCAGCC
TTCGGCTATC AGGGCCTTGC ATCGCATAAA AAAAAGAAGC TTTCAAAATT GCAGAACTGT
GATGCCCTTA CCGGTCTGCA TAATCTGCAC AGCTTTAAAA ACGAATGCAT CGCGCACCTC
AGACAAAAAG ACGGACACTC ACACGCCATT GTACAGTTCG ATATCAGCAG GTTCAAACTC
ATCAATGACA AATTCGGCTT TACAGAAGGA GACAGCCTGC TGTGCGTGTG CGGCGAGGCG
CTCCACTCCG CCCTGGCGGA CACAGAGTTT TGCGCCCGAA GCTTTGCAGA CCAGTTTACC
GCCTTTCTTC GCTATGACGA CCTGCACTCC CTGAAAGAAC GCATTTACAG CATCATCAAT
ACCATTGAGC AGTGGCGTGC CGGGAGCGGC ATGCCCACCA GGATAGAACT GCGCTGCGGG
GTATATATCC TCGACAGGCA CAGCCACACC CTCGATGACA TCCAGCAGGC CATGGATCTG
GCGGGCTATG CGTTGCAGGA ATCGAAAAAA CGCGGAAAAA GCAAGATGGT GCTCTATGAT
GAAAGCATGC GCAAGACATC GCTGCTCCAT CAGGACCTCA AGGACAGCAT CACCACGGCT
CTGGAGCGGG AGGAGCTGAA AGTATGGTTT CAGCCCAAGG TGAACATGCT CTCCAATTCC
GTGATCGGCA GCGAAGCCCT CGCGCGCTGG TACCATCCGG TGCACGGCCT TCTGCTGCCG
GGGAAATTCA TGCCTCTTTT TGAGCACAGC GGCGATGTAC TGCGTGTGGA TTTTTACATT
TTTGAACAGG TCTGCAAAAC CATACATCAA TGGGAACGCG ACGGCATCAT GGCAAGCACC
GTATCGTGCA ATTTTTCAAG CCAGCACTTC GAGCGCCCGG AATTCTGCCG CCGGCTGGTA
GAAATCGCCT CACGGCACTC CGTACCCCAT GAGCTTCTTG AAGTGGAAAT CACGGAAAGC
ACCATGCTGC AAAACCCAGA TGCGGCCAAT ATACAGATAA AACGCCTTCG GGATCTGGGC
TTCAGGACAA CCATTGACGA CTTTGGCTCC GGCTATTCCT CGCTTGGCCT GCTGCAGCTT
TTCGCTGCCG ACGTCATCAA GTTTGACAGA AGTTTTGTAA AACGGAATAT CGCTGGCAAA
AGGGCGCAGA TCGTGCTTGG CAGCATGATA GAGCTGACGC GCCAGCTTGG TATGAGCGCC
ATCTGCGAAG GTGTCGAAAC GAAGGAGCAG GCCAGTATCC TCATGCAGCA CGGCTGCTAT
AATGCCCAGG GCTTCTACTA CGCGCGGCCC ATGCCCGCAG ACCAGTTTAA AAAACTGCTG
CGCGTGGGGC GGATTTCGCC CGAAAGAGCC GGCAGTACGG CATGA
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| Protein sequence | MNRIAPTIFF LGIIFTLPSA QPFADKAFAR QADLSLPMRR QVASFFPAGT LRTLQSTGPS
TFNLHMAGNS TTASGTTGET AARPDADPAD EAAGAADQDE PLLFHQNKPV IFLAVTILAA
FGYQGLASHK KKKLSKLQNC DALTGLHNLH SFKNECIAHL RQKDGHSHAI VQFDISRFKL
INDKFGFTEG DSLLCVCGEA LHSALADTEF CARSFADQFT AFLRYDDLHS LKERIYSIIN
TIEQWRAGSG MPTRIELRCG VYILDRHSHT LDDIQQAMDL AGYALQESKK RGKSKMVLYD
ESMRKTSLLH QDLKDSITTA LEREELKVWF QPKVNMLSNS VIGSEALARW YHPVHGLLLP
GKFMPLFEHS GDVLRVDFYI FEQVCKTIHQ WERDGIMAST VSCNFSSQHF ERPEFCRRLV
EIASRHSVPH ELLEVEITES TMLQNPDAAN IQIKRLRDLG FRTTIDDFGS GYSSLGLLQL
FAADVIKFDR SFVKRNIAGK RAQIVLGSMI ELTRQLGMSA ICEGVETKEQ ASILMQHGCY
NAQGFYYARP MPADQFKKLL RVGRISPERA GSTA
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