Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0331 |
Symbol | flhA |
ID | 7283988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | - |
Start bp | 401682 |
End bp | 403781 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643581116 |
Product | flagellar biosynthesis protein FlhA |
Protein accession | YP_002478923 |
Protein GI | 220903611 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTCAG CAAGCCTTCC CAAGCTCGAC TACAGCAGAT TTTCCCGTAA CGGAGAAATC ATGCTCGCCG CCGGCGTGGT CATCATCCTT CTGGTCATGC TGGTTCCGCT GCCCACATTT TTTCTCGACA TCATGCTCTG CGTGAGCATT TCCATATCCT TGCTGGTGCT CATTACCACC ATGTTCATGA GCTCCCCGCT GGAGTTCACC ATCTTTCCGT CATTGCTGCT GGTGACCACC CTGCTGCGCC TTTCGCTCAA CGTGGCCGCT ACCCGGCTCA TCCTGCTCAA CGGCGACATG GGCGTTGACG CCGCAGGCTC GGTCATCCGC GCTTTCGGCG AATTTGTCGT GGGCGGCAGC TACGTGGTGG GCGCGGTCAT ATTCATGATC CTGTTCATTC TCAACAAGGT GGTCATCACT GCGGGTACCA CGCGCATCGC CGAAGTGGCG GCCCGTTTTA CCCTGGACGC CATGCCCGGC AAGCAGATGG CTATTGAAGC CGACCTCAAC GCCGGGCTTA TTGATGAAGA AGAAGCCACC GCCCGCCGCA AGGGCATGCG CAAGGAAGCA GACTTTTACG GCGCCATGGA CGGTGCGTGC AAATTTGTTT CGGGCGACGT CAACGCGGGC ATGTTCATTA CCATCGTCAA CATTGTGGGT GGCATCATCA TCGGCATGGT GCAGAAGGAT ATGGACTGGA ACACGGCCCT GATGACCTAT TCGCTGCTGA CCATCGGCGA CGGTCTCGTG TCGACCATAC CATCCATCAT CGTCTCCACG GGAACAGGCC TGCTGGTCTC ACGAGCGGCT TCCGAAGCCA AGATGGGTGA GGAATTTCTG GCCCAGCTTA CCTTCAACAG CCGGGCGCTC AAGATGGTTT CGGCCGTGCT GCTGCTCTTT GCCATTGTTC CCGGTCTGCC CACCATCCCC TTTCTGGTCA TCGCCGGCCT TATTTTCACG GTGGCGCGCC TCACGGAGAA AAATGATGCC GATGAAGAAG CCAGGGAGCG CAAGGAAAAG AATGCCAAGG CCGGGTCCGG CACTGCCGAT ACTCCCGAAG AAGTACAGGC CCTTCTGCCC CTGGATACGC TTGAACTGGA GGTGGGCTAC GGCCTTATTC CTCTGGTTGA CGAAGAGCAG AGCGGCAACC TGCTGGCGCG CATACGCTCC ATCCGGCGGC AGTTCGCGCT GGATATGGGG GTGGTCATTC CTTCGCTGCA CCTGCGTGAC AACCTGCAGC TCAAGCCCGG CCAGTATTCA CTGCTGATCA AAGGCAACCA GGTGGCTTCG GCGGAAATTC TGGTAGACCA TTTTCTGGCT ATGGACCCCG GCAACGTGAC CACCAAGATT CACGGCATAG AAACGCGCGA ACCGGCCTTT AACCTGCCCG CGCTCTGGAT ACCCGACAGC CAGCGCGAAG AAGCCATGCT GGCGGGCTAC ACTGTGGTGG ACCCGGCAAC GGTCATTGCC ACGCACCTGA CAGAAGTGTT CAAACGTCAT CTGTCCGACT TCCTTGACCG TCAGGCAGTT CAGGGCCTGC TGGACACGGT GGCCAAGCAT TCGCCCAAGG CAGTGGAAGA CCTTGTACCC GGCGTGCTGC CCCTCGGCAC TGTGCAAAAG GTACTGCAAC TGCTGGTGCG CGAAAACGTG AGCATACGCG ACATGCTCAC CATTGTGGAA ACACTGGGCG ACTTTGGCGC AGGCGTAAAA AACCCCGACA TGCTGACGGA ATACGTTCGC GAAAAGCTGG CGCGATCCAT CGTGCGCCCC TATCTGGACA GCCAGGGAAC GCTGCCCGTG CTCACCCTTG CCCCCAATGC CGAACGTATG GTGCAGGAAG GCGTGCGCCA GGCAGATACA GGAGCGACCT TTCTTTCGCT CAACCCCGCT TCGGCCCAGC GGCTGGTGCA GAACATCAGT GCAGCCGTGG AAAACGCCGT CAACACGGAC GGCCAGCCCG TACTGCTGGT GAACCCTGTC ATACGGCCGC ATCTGGCCCA GCTTGTCACG CGCTTTCTGC CTTCTGTGCC GGTTATTTCG CAAGCCGAAA TTCCGCCGGA CATCCGCCTT CAGGCTGTGG GGAGCGTTGC TGCGGAATAG
|
Protein sequence | MASASLPKLD YSRFSRNGEI MLAAGVVIIL LVMLVPLPTF FLDIMLCVSI SISLLVLITT MFMSSPLEFT IFPSLLLVTT LLRLSLNVAA TRLILLNGDM GVDAAGSVIR AFGEFVVGGS YVVGAVIFMI LFILNKVVIT AGTTRIAEVA ARFTLDAMPG KQMAIEADLN AGLIDEEEAT ARRKGMRKEA DFYGAMDGAC KFVSGDVNAG MFITIVNIVG GIIIGMVQKD MDWNTALMTY SLLTIGDGLV STIPSIIVST GTGLLVSRAA SEAKMGEEFL AQLTFNSRAL KMVSAVLLLF AIVPGLPTIP FLVIAGLIFT VARLTEKNDA DEEARERKEK NAKAGSGTAD TPEEVQALLP LDTLELEVGY GLIPLVDEEQ SGNLLARIRS IRRQFALDMG VVIPSLHLRD NLQLKPGQYS LLIKGNQVAS AEILVDHFLA MDPGNVTTKI HGIETREPAF NLPALWIPDS QREEAMLAGY TVVDPATVIA THLTEVFKRH LSDFLDRQAV QGLLDTVAKH SPKAVEDLVP GVLPLGTVQK VLQLLVRENV SIRDMLTIVE TLGDFGAGVK NPDMLTEYVR EKLARSIVRP YLDSQGTLPV LTLAPNAERM VQEGVRQADT GATFLSLNPA SAQRLVQNIS AAVENAVNTD GQPVLLVNPV IRPHLAQLVT RFLPSVPVIS QAEIPPDIRL QAVGSVAAE
|
| |