Gene Ddes_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0295 
Symbol 
ID7283951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp353981 
End bp355147 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content60% 
IMG OID643581080 
Productbenzoate transporter 
Protein accessionYP_002478888 
Protein GI220903576 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3135] Uncharacterized protein involved in benzoate metabolism 
TIGRFAM ID[TIGR00843] benzoate transporter 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCCAGT TACAGAAAGA TTTTTCCACC ACAGCCGTGG TGGCGGGCTT TTTGGCGGTA 
GTGGTGTCAT ACGCCGGTTC CGCCGTGCTT ATTTTTCAGG CCGCGCATCT GGCGGGCCTT
TCCGAACAGC TGACCACCTC CTGGATATGG GCAGTATCCA TAGGCAGCGG GCTTACGGGA
CTGCTACTGA GCTGGAGGAT GCGCATACCC GTCATTACCG CATGGTCAAC ACCGGGCGCG
GCCCTGCTGG TATCCATGCT GCCCGGTGTG CCTTTTGCCG AAGCCGTGGG CGCCTATCTG
GCAAGCGCGG CCATCATAAC GGTCATCGGC ATGACCGGAT CGCTGGACAT CATCATGCGG
CGCATCCCTG TTGCCGTCAG TTCTGGCATG TTCGCGGGTA TCCTGTTCAG CTTCGGGGCC
AAAATTTTCA CGTCCGTGCA GGCCTCCCCG CTGCTGGGCC TGTCCATGCT GTGCTGCTTC
ATCCTGTTCA GGCGGCTGTG CCCTCGCTAT GCCGTTGCCG CTGTGCTGGT GCTTGGCGTT
GTCATTGCAT CGCTCACCGG CATGATGCAC TTTGAGGCCA TCCATTTTTC ACTGGCAAAA
CCGGTATTCA CCGCGCCCCA ATGGTCCGGC GCAACCATCA TAAGCATCGG GCTGCCCCTG
GCCCTGGTAA CGCTGACGGG CCAGTACATA TCGGGCATGG CCGTTTTGCA TGCTTCGGGT
TATCCGGTGG CGTCCAACGG CATCATGACT GTAACCGGGC TGGCCTCACT GCTGTTCGCC
CCTTTCGGCT CCCACGCCAT CAACCTGTCA TCCCTGACGG CGGCCATCTG CACCGGCAAG
GAATCGCATG AACATCCCTC ACGGCGTTAT GTGGCCGGAC TGGCCTGCGG CGGGCTGTAT
GTGCTCATCG GCCTGTTCGG GACCACCCTT ACCTCGCTTT TCGCAGCCCT GCCCCCGGCA
TTCATCGCCA TGCTGGCAGG ACTGGCCCTC CTGAGCGCCT TCACCACGGG TTTTTACGGC
ATTTTCAGGG ATAGTGACAA TATGGAGGCC GGGATCATAG CCTTTCTCGC CACAGCCTCG
GGCATGGAAC TGCTCGGCCT GGGTGCGCCC TTCTGGGGGC TTGTTTTCGG GGCTGTGGCC
TGCCTTGTCT TGAAAAAGCA AAAATAA
 
Protein sequence
MSQLQKDFST TAVVAGFLAV VVSYAGSAVL IFQAAHLAGL SEQLTTSWIW AVSIGSGLTG 
LLLSWRMRIP VITAWSTPGA ALLVSMLPGV PFAEAVGAYL ASAAIITVIG MTGSLDIIMR
RIPVAVSSGM FAGILFSFGA KIFTSVQASP LLGLSMLCCF ILFRRLCPRY AVAAVLVLGV
VIASLTGMMH FEAIHFSLAK PVFTAPQWSG ATIISIGLPL ALVTLTGQYI SGMAVLHASG
YPVASNGIMT VTGLASLLFA PFGSHAINLS SLTAAICTGK ESHEHPSRRY VAGLACGGLY
VLIGLFGTTL TSLFAALPPA FIAMLAGLAL LSAFTTGFYG IFRDSDNMEA GIIAFLATAS
GMELLGLGAP FWGLVFGAVA CLVLKKQK