Gene Ddes_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0132 
Symbol 
ID7283786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp168871 
End bp169875 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content61% 
IMG OID643580920 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_002478730 
Protein GI220903418 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTCA AACTGGGATT GAACGGCTTT GGCCGTATCG GCCGCTACCT GCTGCGGCTG 
CTGGCCGATG ACCAGGATCT GCAAATCGTC GCCATCAACG CGCGCGCCGA TAATGCCGCC 
CTGGCCTATC TTTTCAAGTA CGATTCCACG TACGGCAATT TTGCGGGCAC GGTGGACCAT 
GATGAAAACG GCATTATCGT CAATGGCCGT CACATCGCCG TTACCCGCTG CAAGCCCGGC 
GAATGGGAAT GGAAGCGCCT TGGCGTGACC ATTGCCGTGG AAACCACGGG GACCATCAAG 
GACGGCGAAG GCCTCGCCAT GCACCTGGCC TGTGGCGCGG AAAAGGTCGT TATTTCTGCT 
CCGGCCAAGG ATGTGGACGC CATGATAGTT ATGGGCGTCA ACGATCATGT CTATGACTGC 
GCCAGACACA AGGTCATTTC CGCCGCGTCC TGCACCACCA ACTGCCTGGC CCCCGTGGTC 
AAGGTGCTGC ACGAAAAGTT CGGCATCCGT CACGGCCTCA TGACCACCAT CCACAGCTAC 
ACCATGAGCC AGCGTATTCT GGACGGTTCA CACAAGGACT GGCGCCGGGG CCGCTCGGCT 
GCCGTGTCAA TGGTTCCTTC CAGCACGGGC GCGGCCAAGG CCGTGGGTGT GGTGATGCCC 
GAGCTTGAAG GCAAGCTCAA CGGCATGTCC GTGCGCGTTC CTACCTTTGC CTGCTCTCTG 
GTGGACCTGA CCTGCGAGGT CGAGCGTTCC TGTGACGCCG CCGCCGTCAA TGCGGCCCTC 
AAGGCTGCCA GCGAAGGCGT CATGGGACCG AATATGGGCT TTTCTGAAGA GCCGCTGGTC 
TCCATCGACT ACCGGGGCAG TACCCACGGC GGCGTGGTGG ACGCGCTCTC CACCCAGGTG 
CTGGACGGCA GCATGGTCAA GGTGCTGATC TGGTACGATA ACGAAGCGGG TTTTACCAAC 
CAGCTTTTGC GCCTGTTGCG TATGGTGGGC AGCCGCTGCC GCTAG
 
Protein sequence
MPVKLGLNGF GRIGRYLLRL LADDQDLQIV AINARADNAA LAYLFKYDST YGNFAGTVDH 
DENGIIVNGR HIAVTRCKPG EWEWKRLGVT IAVETTGTIK DGEGLAMHLA CGAEKVVISA 
PAKDVDAMIV MGVNDHVYDC ARHKVISAAS CTTNCLAPVV KVLHEKFGIR HGLMTTIHSY 
TMSQRILDGS HKDWRRGRSA AVSMVPSSTG AAKAVGVVMP ELEGKLNGMS VRVPTFACSL 
VDLTCEVERS CDAAAVNAAL KAASEGVMGP NMGFSEEPLV SIDYRGSTHG GVVDALSTQV 
LDGSMVKVLI WYDNEAGFTN QLLRLLRMVG SRCR