Gene Ddes_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0106 
Symbol 
ID7283758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp138947 
End bp139396 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content57% 
IMG OID643580892 
Producttranscription activator effector binding 
Protein accessionYP_002478704 
Protein GI220903392 
COG category[S] Function unknown 
COG ID[COG3708] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATGAAT TCAAGGCAAC TGTTGTGAAT TTTCCGGCGA CACGCCTGAC GGGCATGAAG 
GTTCGCACCT CGCTGGCTCA TGCGCAGCAG GATTGTCCGG CCGTCTGGCA GCGGTTTGGG
CCGCGCATGC CCGGTATTGA GGGCAGGCAG AGCTTTGGCG TTTCCATCAT GCTCAGTGCC
GAGGAGATCG AATACTGGGC AGCGGTGGAA GCGGATGGAC GCGAACTTCC GGCCGATATG
GGCCATGTGG ATGTTCCCGC GGGAACATAT GTGGCCTGCC GGGTGCCGGA CCTGGAAAGT
ATCGGGATCG CCTACATGTT CATTTTTGAA AAATGGCTCG GCAGCCAGGA AACCTATGCA
TATAACGAGC AGGTCCCGTG CTTCGAGCTG TATCCTCCGG CCTGGTGCCC TGACGTTCCT
TTTGAAATCT ATGTGCCGTT AAAGGGCTGA
 
Protein sequence
MDEFKATVVN FPATRLTGMK VRTSLAHAQQ DCPAVWQRFG PRMPGIEGRQ SFGVSIMLSA 
EEIEYWAAVE ADGRELPADM GHVDVPAGTY VACRVPDLES IGIAYMFIFE KWLGSQETYA
YNEQVPCFEL YPPAWCPDVP FEIYVPLKG