| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0014 |
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| Symbol | |
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| ID | 7283665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 19079 |
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| End bp | 20659 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643580799 |
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| Product | NusB/RsmB/TIM44 |
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| Protein accession | YP_002478612 |
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| Protein GI | 220903300 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGGA ACAGGAACAT ATCGTTGCGT AAGCTGTCGT GTAACGGCCG CACGGCTGCC
CTGCGGGCGC TGTTGCTGGT TGATGACGGG CTGAGCGCCC AGCAGGCCCT TGCATCTGTT
CTGGACGCCC CTGTGGCGCA CGGGGCTTCA GGCAACTCGC GCGAAAAGAG CCACACCGCA
AATGCCGGCA GATGCCAGGG GCTTTCAGCG CAGGACAGGG CGCTGTGCAC CGAGCTTGTA
TATGGCTGCC TGCGTACCGA ACTGCGCCTG AATTTTCTGT TGGGCAGGGT TTTGCCACGG
CCCCAGGGTC TGCCGCGGCC CATGCAGATA CTGCTGGCGC TGGCAGTATA CGGCCTGCTG
TTTCAGGACA AGGTTCCGTC CCATGCTGTG GTTTATGAAG CCGTGGAACA GGCAAGAGCA
CTTTTTGGCC AGGGGCTGGC CCGGGTCGCC AACGGCGCAT TGCGATCTTT GCAGCGCATG
GGGGAAGAAC CGGCGCAACC ATCCTTTTAT GCGGGGCAGT CGGGTGTAAA AAAATACCGG
CATGGCGCGG GCGGCACAGA CAGTTTTTTG GGAAAATGTA TCTTTTATTC CATCCCCTTG
TGGATTGGTG AGCTTTGGCG TTCCGCCTAT GGTGACGAGG CGGCCTTGAG GCTTATGCAA
CGCTCTTTTG AACGTCCCTG GGCCGCATTG CGGATCAATG CCCGCCATAC CGATGGTGCA
GCTCTGCACG CGGTTTTGGC GGCTCCGCAG GCGGAAGGGC GCGCATCTGC GATAGCCGGA
TTATCCGGCG CGGCCACAGA AAGCGGTGCT ACAGAACAAG ATTCTTTACA ATATCATATT
GATATTGCAG ATAGAGTAGA TAAGAATGAA AATAATGAGG GTCAGGGCAA CGGCCATAAG
CCCGTTGCCA TTGGGCAGTG GGGTCTTGCC TTCGCACCCG GAACCATGCC GCGCGAGGCC
CTTGGCCTTG ACCTGAGGCA ATGGCTGGCA CGGGGCGCAT TAAGCTGGCA ATCAGCCGGG
TCTCAGCAGG CTTTGCTCGC TCTTGGGCTG GACCGCTGGC ATGAACCTGT GTGGGATGCC
TGCGCCGGGC ATGGCGGCAA AAGCACGGCC CTGATGGAGT GGGGTGTGCC GGTGAGTTTG
TGCACAGACC GTTCTTTTGC GCGTTTGCGG GGGCTGCCCA CCCAGTGCAC AACACTGGGA
TTGCCAGTGC CGCCGCACTG CCTGGCTGAT GCCATCCGAC CTCCGGTAGG GCAATGGCCC
GGCCATATCC TGGTGGACGC GCCCTGTTCC GGTCTGGGAG TGCTGGGCCG AAGGCCGGAT
ATCCGCAGGC GGGAACCGCA ACATCTTGCT GAACTTGAAG TCCTGCAACA AAACATGCTG
CGCGTGCTTG CCGACATATT GCAGCCCGGC CGGGAACTGG CCTATATAAC CTGTACCCTC
AATCCGGCTG AAAACGAACG TGCTGTGGAC CAACTGCTTG AAAATAATTC TGATCTGACA
ATTGAACGCC AGTGGCAGAC AGGGCACAGC CATCCCTGGC TTGAGGGAAT GTTTGGCGCT
GTACTGCGCA AAAAAGGCTG A
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| Protein sequence | MSRNRNISLR KLSCNGRTAA LRALLLVDDG LSAQQALASV LDAPVAHGAS GNSREKSHTA
NAGRCQGLSA QDRALCTELV YGCLRTELRL NFLLGRVLPR PQGLPRPMQI LLALAVYGLL
FQDKVPSHAV VYEAVEQARA LFGQGLARVA NGALRSLQRM GEEPAQPSFY AGQSGVKKYR
HGAGGTDSFL GKCIFYSIPL WIGELWRSAY GDEAALRLMQ RSFERPWAAL RINARHTDGA
ALHAVLAAPQ AEGRASAIAG LSGAATESGA TEQDSLQYHI DIADRVDKNE NNEGQGNGHK
PVAIGQWGLA FAPGTMPREA LGLDLRQWLA RGALSWQSAG SQQALLALGL DRWHEPVWDA
CAGHGGKSTA LMEWGVPVSL CTDRSFARLR GLPTQCTTLG LPVPPHCLAD AIRPPVGQWP
GHILVDAPCS GLGVLGRRPD IRRREPQHLA ELEVLQQNML RVLADILQPG RELAYITCTL
NPAENERAVD QLLENNSDLT IERQWQTGHS HPWLEGMFGA VLRKKG
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