Gene Dde_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3778 
Symbol 
ID3758766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp3721252 
End bp3722238 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content60% 
IMG OID637784700 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_390265 
Protein GI78358816 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCAAC ATCACACCAC GGACGCCATG CACGATAATA CACCCCTTCT GCAGATAACA 
GACGTTTCGC GCAGCTTTAC GTTACGGCAG AAGCTGTTCG ACGCTGCCGC CGACACGGTG 
AAAGCCGTGG ATTCCGTCAC ACTGCACATC AGCAGGGGAG AAACGCTGGG ACTGGTGGGT 
GAAAGCGGAT GCGGAAAAAG CACGCTGGCA CGCATGACAG CCGGACTGCT AAAACCGGAT 
TCCGGCACGG TGCATATAAC TCCGGACTCC GGCGGTAGCG GCCGCATTGC CAACGCATCC 
GGTGTGCAGA TGATTTTTCA GGATCCTTTT TCGTCGCTCA ATCCGCGCAT GCGGGTGGGA 
CGCAGTATCG GAGAGGCCCT TGAAGTACAG GGAATGCCCC GTGCGGCAAG GCGCGCGCGG 
GTGGAACACC TGCTTGCCGT AGTCGGGCTG GCGCCGGAAC ATTATGACCG TTATCCGCAC 
GAGTTTTCCG GAGGGCAACG TCAGCGCATC GCCATAGCAC GGGCTCTTGC CCCTCAGGCT 
TCTCTGCTTG TCTGCGACGA ACCGGTTTCC GCGCTGGATG TTTCCGTACA GGCGCAGGTA 
CTCAACCTGC TGGCAGACCT GCGTGATTCA CTGGGACTTT CCATGCTGTT CATATCGCAC 
GATCTCAGCG TTGTCAGACA CTTCTGCCAT CGTGTTGCGG TCATGTATCT GGGACGCATC 
ATAGAAACAG CCCCGCGTGA CATGATATAC AATGCCCCCC TGCACCCGTA CACCAAAGCT 
CTGCTGGCAT CGCTGCCGGT ACCTGACCCC GATGCCAGAA CAACGCATAC ACGTCTGCAG 
GGCGAACCGC CCAGTCCTGT CAGCCCGCCC TCCGGCTGTC ACTTCCACCC GCGATGTCCG 
CACGCCATGC CGCATTGCCG CACGCACATT CCCGCAGAAA CCGTCCTGCA CGGCAGACAC 
CGCGTCCGGT GCCACCTGTA TGCATAA
 
Protein sequence
MPQHHTTDAM HDNTPLLQIT DVSRSFTLRQ KLFDAAADTV KAVDSVTLHI SRGETLGLVG 
ESGCGKSTLA RMTAGLLKPD SGTVHITPDS GGSGRIANAS GVQMIFQDPF SSLNPRMRVG 
RSIGEALEVQ GMPRAARRAR VEHLLAVVGL APEHYDRYPH EFSGGQRQRI AIARALAPQA 
SLLVCDEPVS ALDVSVQAQV LNLLADLRDS LGLSMLFISH DLSVVRHFCH RVAVMYLGRI 
IETAPRDMIY NAPLHPYTKA LLASLPVPDP DARTTHTRLQ GEPPSPVSPP SGCHFHPRCP 
HAMPHCRTHI PAETVLHGRH RVRCHLYA