Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3272 |
Symbol | |
ID | 3758249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 3264981 |
End bp | 3265529 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637784185 |
Product | propanediol utilization protein (PduT)-like |
Protein accession | YP_389761 |
Protein GI | 78358312 |
COG category | [C] Energy production and conversion [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATACGC TGGGGCTGGT TGAAAGCAGA AGCATCGCCG CCGGAGTGAA TCTGGCGGAC GGCATGGTCA AGGTGGCGCA GGTGGAACTT GTGCGCGCCG GCACCATCTG TTCCGGCCGC TACTTTATCT GTCTCGGGGG CGACAGGCAG GCCGTGCAGA CGGCTGTCAG CCATGCGGAA CAGTCCGGCA GCGCGCTTGC CGGCAGTTAC GTGATTTCCG GCGTGTCGCC GCAGGTGCTG GCGGTGCTTA AAAAAAGCGT GCAGCCCGGT ACCCCGGGCG CGCTGGGCGT TGTGGAATGC CGCACTGTTT CCGCCGGTAT TGCCGCAGCG GATGCCGCGG TCAAACGCTC CGGCATCAGC CTGCTGCGTC TTGTGACAGG GCAGGGCATC AACGGCAAAT CATATTTCGT GTTCAGCGGT GATGTAGCAT CTGTGCAAGA AGCCGCAGAC GCTGCAAAAA CAGCTTTGGG CAGGCATCTT ATCGAGTCGG TGGTCATAGC CAGACCGGAC GCCTCGGTCG TCAGGGCCCT AACAAGCGGT GTGAGGTAA
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Protein sequence | MDTLGLVESR SIAAGVNLAD GMVKVAQVEL VRAGTICSGR YFICLGGDRQ AVQTAVSHAE QSGSALAGSY VISGVSPQVL AVLKKSVQPG TPGALGVVEC RTVSAGIAAA DAAVKRSGIS LLRLVTGQGI NGKSYFVFSG DVASVQEAAD AAKTALGRHL IESVVIARPD ASVVRALTSG VR
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