Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_3265 |
Symbol | |
ID | 3758242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 3260839 |
End bp | 3261390 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637784178 |
Product | putative propanediol utilization protein PduT |
Protein accession | YP_389754 |
Protein GI | 78358305 |
COG category | [C] Energy production and conversion [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATTTGC GTACTATCGG ATGTGTGGAG CTGAACAGCG TTGCCATGGG CATGCATACT GCGGATGAAA TGGTAAAGGC TGCTGAAGTG GAACTGGTGG TGGCCCGTCC CACCTGTCCG GGGCGGTATA TAGCCATTGT GGCCGGTGAT ACCGGCGCGG TGAAAAGCAG TGTGGAAACA GGCTGCCGCA TAGGCGGTGA AATGCTTGTT GACTCTTTTG TGCTGGCCAG TGTGCATCCC GACGTTATTC CGGCATTGGG CGGCGCCCCC GAAGATGCCT CCATAAATGC ACTGGGTGTC ATAGAAACCT GTACCTCCGC TTCCTGTATT CTTGCCGCGG ATGCCGCGGC AAAAGCCGCA CAGGTTCATC TGCTCGAAAT CCGCTTTGCA GCCGGACTTG CCGGCAAGGC TTTTGTGGTC ATGACCGGCG ATGTCAGTTC GGTGCAGGCG GCCGTAGAAG CAGGAGTGGC CGGTGTGGGC GAATCCGGTC CGGTGCTCAG CCATGTGGTC ATTCCTTCTC CTAGTGAAGG GCTGAAGGCC AGAATTTTGT AA
|
Protein sequence | MDLRTIGCVE LNSVAMGMHT ADEMVKAAEV ELVVARPTCP GRYIAIVAGD TGAVKSSVET GCRIGGEMLV DSFVLASVHP DVIPALGGAP EDASINALGV IETCTSASCI LAADAAAKAA QVHLLEIRFA AGLAGKAFVV MTGDVSSVQA AVEAGVAGVG ESGPVLSHVV IPSPSEGLKA RIL
|
| |