Gene Dde_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_3253 
Symbol 
ID3758230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp3251428 
End bp3252930 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content47% 
IMG OID637784166 
Producthypothetical protein 
Protein accessionYP_389742 
Protein GI78358293 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAAA ACACCATGTC GATGCCGATA GGTCTACTGC GTGAATTCAT CATGGAAGAT 
CTGCGTGCCA AGCCTGGCGT GCGCAGAAAT GAAGAAATAG CAGTTTATAT TTCGACATGG 
CTGGGGACCC CGGTGCCCTG GTATAGTATG ATCATTGGTG TTTTGCTGCA TAGACGGGGG 
TATTCTGTCC GGTTTGTGTG GGACGATCTG TATGATCCTT TACAACCATC TGATATTGTA 
CACAACGAAG AGATTGCCGA AGCTCTTTTG CTGCTGTCAA GCAGGGGGCT TCGCACCGAT 
AAGTTGTCGA AAATGAAGCA AATTGCCCCT TCGGAAGACT ACCTGAAGGA GGCTTTGAGG 
CTGGCCTCGC TGCATTCCAT CTGGTGGCAC AAAACACCTG TTCCTGCGCC AGAACTCCAT 
ACCCGTCGGC TGCAAAGTCT CAAGGTCATG ATCGACAATT TGCCGTATAT ACTGGGATAT 
TTTTCTGAAG TTGCGCCGCG CAGGTTGCTT ATGCCCGGGG GGATTTTTGC AAATTCTGGT 
TTGTTTTTAT GCGCCTGTGC CCAGAATGGC GTTATTGCAA CGACTTATGA CAGTGGTGTT 
TCGTCAATTT CAACTGGGGT GAATTCTGTT GCGGCACATT TAGATGACAT TCCGCACGTC 
ATGTGCCAGC TGCTGGATGC TGATAATGTG ATAGCGTATG CCCGCGAAGC AGGGGGAGCA 
GAGTTACAGA AACGCTTCAG CGGTGTTGAT AAGTATCATT TCCAGCCTGT GGAGAGAAAT 
TCAGGGCATG TGCAGAAGTA TGATGTCATC TTTCCGCTGA ATATCGAAAA TGATTCTTCG 
GCACTCGGAA AGCATGTATT TTTTAATGAT TCGCTTCAGT GGCTCACGGA AACGATAGAT 
TTTATATTCA CAGAAACAAA GGCACATATT GCTGTCAGGC AACATCCCTA TGAAAAGCGC 
ATTCCGTGGC GAAATGACGC TCTGATACAC ACACTTAAAG AACGTTATGC GTCTACAGAA 
CGCATTGCGA TTTTCGATTG TAATTCACAA ATTAATACTT ATGACATTAT TGCATCTGCA 
AGCTTGATTT TGCCTTTTGT GTCCTCCATT GCTGTTGAAG CGGCAATTAT GGGCAAAACA 
GTCATTCCTG TTGCTCCTGC TTTCTATGCA GGGTTCTCTT TTGCGCAAAT GCCGGCTAGT 
AAAGGTTCTT ATTTTACATC AATATTGAAA AGTCTGGAAG TGAAGACTGA AGTGCCTCCC 
GAAGCAAAAG ACGAGGCCTG GTTGGCATAT TATTTATCTC AGATTTGCGG GCGGATTTGG 
ACAGACTTTA CTCCGCAGCC TGAGGACTAT GCGCGTTGGG AGGGGCGGTC ACTTGCACAG 
CTGGAATCAG ACATGAATGT TGAAGCAGTG TTGAAATGCC TCGGAGACGG TGCCTACATT 
TCAATGGTCC AGCATGAACG CATACAGCGT GAAGGGCTTG CGTCAGTTTA TCGCTGTTTC 
TGA
 
Protein sequence
MRENTMSMPI GLLREFIMED LRAKPGVRRN EEIAVYISTW LGTPVPWYSM IIGVLLHRRG 
YSVRFVWDDL YDPLQPSDIV HNEEIAEALL LLSSRGLRTD KLSKMKQIAP SEDYLKEALR 
LASLHSIWWH KTPVPAPELH TRRLQSLKVM IDNLPYILGY FSEVAPRRLL MPGGIFANSG 
LFLCACAQNG VIATTYDSGV SSISTGVNSV AAHLDDIPHV MCQLLDADNV IAYAREAGGA 
ELQKRFSGVD KYHFQPVERN SGHVQKYDVI FPLNIENDSS ALGKHVFFND SLQWLTETID 
FIFTETKAHI AVRQHPYEKR IPWRNDALIH TLKERYASTE RIAIFDCNSQ INTYDIIASA 
SLILPFVSSI AVEAAIMGKT VIPVAPAFYA GFSFAQMPAS KGSYFTSILK SLEVKTEVPP 
EAKDEAWLAY YLSQICGRIW TDFTPQPEDY ARWEGRSLAQ LESDMNVEAV LKCLGDGAYI 
SMVQHERIQR EGLASVYRCF