| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2950 |
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| Symbol | |
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| ID | 3757955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2928725 |
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| End bp | 2930857 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637783851 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_389439 |
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| Protein GI | 78357990 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTTT TTTCTGCCCT CATGCGCCGC TCATGCGCCT TTTTTCTGAT GCTTGCACTA
TGCCTGTGCC TGCAGACAGC AGGGCACGCG CATGGGCAGA CACTGGAATT CCGGTGTGAT
GACAGCCTGC CGCCCTACGA GTTTCTGGCC TACGGCAGGG CGCAGGGCTT CACCGTGGAC
CTGGTGCAGG CCATCGCCCG CGACAGCGGG CTGCATGTGC AGATCATCCC CGGACCGTGG
CATGTCATCA AGGCGGAACT GGACGCCGGC AACACCGACG CGCTGACCGG CATGTACTAT
ACGCGCGAAA GAGCGCGGCA GGTTCTGTTT TCAGAACCCT ATACCGTGGT CTCGCATTCC
ATTTTCGTGC GCAAAGGCTC CCGCGCCATG ACGGCAGAAG ACCTGAAAGG CGCCGTGGTG
GCGGTGCAGC GCAACGACAT CATGCATGAA TACGCGCAGA AGCACCTGAC CGGCAGCACC
CTGCTGCCCT GTACCACCCG TCTGGAGGCT CTGCAGGCCG TTTCGGACGG ACGGGCAGAA
GCAGCGCTGC TCGGCAGGCT CATGGCCCTG CAGCTTATGT ATGAACACAA CATCACCAAC
GTCACCGTAT CAGGAGAAGC ACTGCTCACC ACCCCGCTGT GTTTCGGTTT TGCACCGGAC
AGAAAAGACA TCATGGTCAT TTTCAATGAA GGGCTGGCCC ATCTCAGAAT GACCGGTGAA
TTTGACGTCA TCTACGAAAA ATGGTTCGGC CGGCTGGAAC GCAGGGCTGC AGAAGAAGTG
GTGCGCCGTT ACGCGGCATG GGTGCTCACC CCGCTTTTTT TCATCATGGC CGCGGGACTC
TGCTGGCTGG TTATTCTGAA AAAACGGCTT GCCCGCCGTA CACTGCAGCT GCAGGTACAG
GTGGAAAAGC TGCAGGAAAC CGAAAAAGCC CTTGCCGAAA GCGAGCGGCA GTACCGGTCC
ATTTTCGAAA CCATCCGCGA CGGATTCTAC AGGGCCGACA TGCAGGGGCG CGTTGTATTA
TGCAACCCTG CGGCGGCCGA CATGCTGGGT TATTCCATGG AGGAACTGGC AGGAAAAAAC
ATAGCACAGG ACCTGTACAG ACACCCCTAT GAACGCCGGA AACTGCTCAG CCATCTGGAA
CGCGAAGAAG CAGCGGCCAA TGTTCAGGTT GAAATGCTCC ACAAAAACGG CAGCATTGTG
CTTATAGAAA CCAATTCACG GCTCGTGCGC GATGAAACAA CAGGGGAACC CGTGGCCGTG
GAAGGCGTCA TACGCGATGT GACAGCGCGT AACAGACTGG AAGCGCTTAT AGCCAGAACG
GAAAAAATGA TATCGCTGGG GGGGCTGGCT TCCGGCATGG CACATGAAAT CAACAATCCG
CTGGGCGCCA TCCTGCAGGG GGTCCAGAAC ATAAGCCGCA GGCTCGACTC CCGCCTTGCC
GCAAACATAC AGGCTGCGGC AGACAGCGGT ATCAGCACGG AAGGGCTGGA AGACTATATC
CGCAGACGCA ATATACGCAA ATTGCTGCAC AGCGTGCGCA GCGCAGGTGA ACAGGCGGCG
GGCATAGTGC GCAGCATGCT CAGCTTCAGC CAGACAGGAA CTCCTGTCCT CATGCCCAGC
GACATCAATG CACTGACGGA ACGTGTCATC ACGCTGGTGC GCAGCGAATG CCGTCTGTCC
GAGCAGCTGT GTTTCAGCGA CATAGCGCTG CACGTCGAGC TGGCATCAGG ACTGCCGCCC
GTGCCCTGCA GTCCGGCAGA AATAGAACAG GTGCTGCTGC ATCTGCTGCG CAACGCCGCT
CAGGCGCTTG CCCACGGAAA AACAACAGCC CCGCGCATAA CCATACGCAC GGCACTTGAT
GCCCGCCATA TACGCATAGA GGTGGAAGAC AACGGCCCCG GAGTGGATGA AGATACCGCA
CGGCGCATAT TCGATCCATT TTTCACCACC AGAGAAGTGG GACAGGGCAC CGGACTCGGA
CTTTCCGTCG CGTACTTCAT CGTTACCCAG AACCATAACG GCAGCATTTA TCATGAACCG
GCAGAATCCG GCGGCGTGCG TTTCGTCATC CGCCTGCCGC TTTTCCCCGG TGCCCCCTCC
GGACAGGATG CCCGGCCCTC CTCCGCCCTT TGA
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| Protein sequence | MRVFSALMRR SCAFFLMLAL CLCLQTAGHA HGQTLEFRCD DSLPPYEFLA YGRAQGFTVD
LVQAIARDSG LHVQIIPGPW HVIKAELDAG NTDALTGMYY TRERARQVLF SEPYTVVSHS
IFVRKGSRAM TAEDLKGAVV AVQRNDIMHE YAQKHLTGST LLPCTTRLEA LQAVSDGRAE
AALLGRLMAL QLMYEHNITN VTVSGEALLT TPLCFGFAPD RKDIMVIFNE GLAHLRMTGE
FDVIYEKWFG RLERRAAEEV VRRYAAWVLT PLFFIMAAGL CWLVILKKRL ARRTLQLQVQ
VEKLQETEKA LAESERQYRS IFETIRDGFY RADMQGRVVL CNPAAADMLG YSMEELAGKN
IAQDLYRHPY ERRKLLSHLE REEAAANVQV EMLHKNGSIV LIETNSRLVR DETTGEPVAV
EGVIRDVTAR NRLEALIART EKMISLGGLA SGMAHEINNP LGAILQGVQN ISRRLDSRLA
ANIQAAADSG ISTEGLEDYI RRRNIRKLLH SVRSAGEQAA GIVRSMLSFS QTGTPVLMPS
DINALTERVI TLVRSECRLS EQLCFSDIAL HVELASGLPP VPCSPAEIEQ VLLHLLRNAA
QALAHGKTTA PRITIRTALD ARHIRIEVED NGPGVDEDTA RRIFDPFFTT REVGQGTGLG
LSVAYFIVTQ NHNGSIYHEP AESGGVRFVI RLPLFPGAPS GQDARPSSAL
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