Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2787 |
Symbol | |
ID | 3757810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2783756 |
End bp | 2784535 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637783689 |
Product | hypothetical protein |
Protein accession | YP_389278 |
Protein GI | 78357829 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.369354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCTCCA TGATATTAAT TACCGTTTGC TCTTTCATTC TAAGCTTCAT TTTCGCTTTA GGGGGAGTTG GTTCGGCCCT TGTCCTTATC CCAACATTGA CTTGGTTTGG GGTACCCTTT TCCCTGGCAC GTCCAACTGG CCTTTTTGTG AACACAGTAA GCATGACCGG TGCAACATTT TCAAACATTA AAGAAAAACG CCTTGATTTC AAACTCGGCA TTCCCATCAT TATATCTTCT ACCATCATGG CACCAGCTGG AGCGTATATT GGACATATCA TGCCAACCAA ATGGGTGATG CTTTGCTTTA TCAGCTTTTT AACGTTCTCC GGATTTATGA TGCTCTTTTT TAAAAAATCA AAATATGCTT CGCAATATAG GGAGGACCGC CCTGTTGCAT GGCCAACTTT TGTCGGAATC ATTGCAGGTT TCATGTCAGG CTTACTAGGA GTAGGTGGCG GAGGTTTAAT ATCTCCACTC ATGATATTAA AGGGCTTCAA CCCAAAAAAA GTCGCGACGG TAACAGCCTT CTCCGTCCCA TTTTCATCAT TTTCCGCATT TGTCACCTAT GCTGCTATGG GATCAGTATC GTTCAAAATT TTAATTTTTG CGGGGATTGC CGCTTGGACA GGTGGGTATA TGGGAACCAA AGTGATGCAC TTAAAATTGC AGCCAGAAAC GGTCAAACGC GTCCTAGCTT GCGTTTTGCT GATAATGGCA GGAAAGTTAT TGCTGAGTTT CATGTTCTCA GGCACCGATT TTTTATTGCC TCATGCATGA
|
Protein sequence | MTSMILITVC SFILSFIFAL GGVGSALVLI PTLTWFGVPF SLARPTGLFV NTVSMTGATF SNIKEKRLDF KLGIPIIISS TIMAPAGAYI GHIMPTKWVM LCFISFLTFS GFMMLFFKKS KYASQYREDR PVAWPTFVGI IAGFMSGLLG VGGGGLISPL MILKGFNPKK VATVTAFSVP FSSFSAFVTY AAMGSVSFKI LIFAGIAAWT GGYMGTKVMH LKLQPETVKR VLACVLLIMA GKLLLSFMFS GTDFLLPHA
|
| |