| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2717 |
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| Symbol | |
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| ID | 3757740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2719507 |
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| End bp | 2720451 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637783619 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_389208 |
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| Protein GI | 78357759 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0212645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAGG AACAAGGCGC AGCTGCCGGC GGCAGGCAGG AAAAAAAACG TATCAAAGGC
GTTTTTTCCA CGCAGGAAGT CCGTAAGGTG GGCACGGGAA CCACGACCCG TAAAACCATT
CAGAAAGCAT TCTGGATGGT GGAGGAACTG GACGACGGTG TGGTGGAGGT GCAGCCCCTG
AACAGCAACT ACATTCCTTC CGGTCCCAAG CGCAAGGTGG CTTTGGACGA TGTGCTGAGC
ACCTTTCAGC CCGAACCGGA ATTCTATGTG CAGACTGTGT TTCCCAAAAT GCAGGAACTG
AACAAAACCG TGGCCCGTGC CGACAGGCAC CGTTCACGGG GCGAGCATTT CAGCGCGGAG
TTTGAATACG GCAATGCCCT GAAGGTGGAC GAAGAAAACG TGCGTGCCAA CTTCGGGCTG
GGACTTACCT ATCTTGAACG GGGAGAATCG GCCAAGGCGG ACAATATCTT TGAGCGGCTG
GTCAAGCTGG AGGCGGCATT TGAGCCGGAG CACAAGCACC TGTTCAACGA ATTCGGTATC
AGTCTGCGCA AAAACAAGAT GTTCGAGCAG GCCATCGAGT ACTACGAACG TGCGCTGGAG
CTTTCCGGCA GCGATGAAAA CCTGCAGTAC AACATGGCGC GGGCCTGTCT GGAGATGAAA
GACTATACAC GCACCATGGA GCACCTGCTC AAATGTCTGG ATGCCAACCC TTCGCTGGAA
GCGGCAGGCA AGTTTCTGGC ATGGATGAAA GCCAAGGATC TTGTTCCGCA GGAGATGAAA
GGTGCCGCGC TGGACATGCT GCGCCGCATC AAGGCTGCAC AGGAACAGGG ACAGAACGGC
GGCGCAGAAC AGCAGGCGCC GGAAGCACGG GACGGGAAGC CGGCTGCGGA ACAGGATACG
GCAAAGCCCG AAGAAAACGG AGCGGCCACG CCCATAGAAT TGTAG
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| Protein sequence | MQQEQGAAAG GRQEKKRIKG VFSTQEVRKV GTGTTTRKTI QKAFWMVEEL DDGVVEVQPL
NSNYIPSGPK RKVALDDVLS TFQPEPEFYV QTVFPKMQEL NKTVARADRH RSRGEHFSAE
FEYGNALKVD EENVRANFGL GLTYLERGES AKADNIFERL VKLEAAFEPE HKHLFNEFGI
SLRKNKMFEQ AIEYYERALE LSGSDENLQY NMARACLEMK DYTRTMEHLL KCLDANPSLE
AAGKFLAWMK AKDLVPQEMK GAALDMLRRI KAAQEQGQNG GAEQQAPEAR DGKPAAEQDT
AKPEENGAAT PIEL
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