Gene Dde_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2560 
Symbol 
ID3757577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp2578541 
End bp2579188 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content53% 
IMG OID637783456 
Product3-Cys thioredoxin peroxidase / 1-Cys peroxiredoxin 
Protein accessionYP_389051 
Protein GI78357602 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.589771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAG GCAAATTCGT GCTTATCGGC GACGCACTGC CCGAAATGCA CGTCACCACC 
ACAAGAGGTC CCATGACGCT GCCCGGCGAC CTGAAAGGCA AATGGTTTGT GCTTTTCAGC
CATCCGGCAG ACTATACTCC CGTATGCACC ACCGAATTCG TGGCGTTTCA GAAACGGTAC
GATGAATTCC GCAAACTGAA TTGCGAACTC GTGGGCCTTT CCATTGATCA GGTTTTCTCG
CACATCAAAT GGGTTGACTG GATCAAGGAA AAAATCGGCG TGGAAATTGA GTTTCCCATC
ATCGCCGATG ATATGGGACA GGTTGCCTCG CGCCTCGGCA TGATTCACCC CGGCAAGGGG
ACCAATACCG TGCGCGCCGT CTTCATAGTG GACGACAAAG GCATTGTCAG AATAATCTTT
TATTACCCGC AGGAACTGGG CAGAAACATG GATGAAATTC TGCGTGCGGT GAAAGGCATG
CAGGTTTCCG ACGCACAGTC CGTCGCCATT CCGGCAGGAT GGCCCGAAAA TGAAATAGTC
CGCGATCACG TTATTGTACC GCCGCCCAAA AGCGTGCAGG AAGCACAGAA GCGCCTTACA
GAAGGCCACG AATGCTACGA CTGGTGGTTC TGCCACAAAA AGCTGTAG
 
Protein sequence
MEEGKFVLIG DALPEMHVTT TRGPMTLPGD LKGKWFVLFS HPADYTPVCT TEFVAFQKRY 
DEFRKLNCEL VGLSIDQVFS HIKWVDWIKE KIGVEIEFPI IADDMGQVAS RLGMIHPGKG
TNTVRAVFIV DDKGIVRIIF YYPQELGRNM DEILRAVKGM QVSDAQSVAI PAGWPENEIV
RDHVIVPPPK SVQEAQKRLT EGHECYDWWF CHKKL