Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_2560 |
Symbol | |
ID | 3757577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 2578541 |
End bp | 2579188 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637783456 |
Product | 3-Cys thioredoxin peroxidase / 1-Cys peroxiredoxin |
Protein accession | YP_389051 |
Protein GI | 78357602 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.589771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAG GCAAATTCGT GCTTATCGGC GACGCACTGC CCGAAATGCA CGTCACCACC ACAAGAGGTC CCATGACGCT GCCCGGCGAC CTGAAAGGCA AATGGTTTGT GCTTTTCAGC CATCCGGCAG ACTATACTCC CGTATGCACC ACCGAATTCG TGGCGTTTCA GAAACGGTAC GATGAATTCC GCAAACTGAA TTGCGAACTC GTGGGCCTTT CCATTGATCA GGTTTTCTCG CACATCAAAT GGGTTGACTG GATCAAGGAA AAAATCGGCG TGGAAATTGA GTTTCCCATC ATCGCCGATG ATATGGGACA GGTTGCCTCG CGCCTCGGCA TGATTCACCC CGGCAAGGGG ACCAATACCG TGCGCGCCGT CTTCATAGTG GACGACAAAG GCATTGTCAG AATAATCTTT TATTACCCGC AGGAACTGGG CAGAAACATG GATGAAATTC TGCGTGCGGT GAAAGGCATG CAGGTTTCCG ACGCACAGTC CGTCGCCATT CCGGCAGGAT GGCCCGAAAA TGAAATAGTC CGCGATCACG TTATTGTACC GCCGCCCAAA AGCGTGCAGG AAGCACAGAA GCGCCTTACA GAAGGCCACG AATGCTACGA CTGGTGGTTC TGCCACAAAA AGCTGTAG
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Protein sequence | MEEGKFVLIG DALPEMHVTT TRGPMTLPGD LKGKWFVLFS HPADYTPVCT TEFVAFQKRY DEFRKLNCEL VGLSIDQVFS HIKWVDWIKE KIGVEIEFPI IADDMGQVAS RLGMIHPGKG TNTVRAVFIV DDKGIVRIIF YYPQELGRNM DEILRAVKGM QVSDAQSVAI PAGWPENEIV RDHVIVPPPK SVQEAQKRLT EGHECYDWWF CHKKL
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