| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2480 |
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| Symbol | |
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| ID | 3757496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2499903 |
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| End bp | 2501495 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637783376 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_388972 |
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| Protein GI | 78357523 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.045241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATTTT CCTGCCGGAG GTTCCAGCGT GCCCACAGTG CCCTGCGTTG CGGCGGGTGT
CCAGAAAAAA GAACCGCAGA CGTGGTGCGT TGCGTCCGGA GGCCCGACGG GGTATGCTGC
CGGTCTTCCG CTCATGAACT TGATCATGTC AAAACAGGAG CTGCTGTGAG CTTTGCCCGT
TTTTCCCTGC ATCCTGCGCT GATTGAAGCG GTGTCGGCCA GAGGTTTTGT CAACCCTACG
CCGATACAGG AAAAAGCCTT GCCGCCCGCG CTGGCAGGTC AGGACATACT GGGACTGGCG
GCAACGGGAA CAGGGAAGAC CGCGGCCTTT GTGCTGCCGC TGCTGCACCG TCTTCTTTTG
CAGGGCGAAA GTGCCCGCGG CACCTTGCGT GCGCTGGTTG TGGCCCCTAC GCGCGAGCTG
GTGGCGCAGA TTCATGAAGA AGTGAAAACT CTGGCCCGTT TCTGCCGATT GCGTTCTGCC
ACTGTGTACG GCGGTGTGGG CATGCACGCT CAGACCGTGC AGCTGCGTAC CGGAGTGGAC
ATTGTGCTGG CCTGTCCCGG CAGACTTCTG GACCACGTAC GCAGAGGTCA TGCCGATCTG
TCTCATGTGG ACATGCTTGT GCTGGATGAA GCCGATATGA TGTTTGACAT GGGCTTTCTG
TCCGATGTGC GCGAAATTCT GCATTGCACC CGCGTCCGGA AACAGACCAT GCTGTTTTCT
GCAACCATGC CGGCGCCGCT GCGCGAACTG GCGGAGGAAT GTCTGCGGCA GCCTGTGCGC
ATAGAGCTTG ACACCTGCGC CATAGCCCCC ACGGTGCGGC ACAGCCTGTG TCCGGTGCCC
AAACATCTTA AAACTCCGCT GCTCAAATAT GTTCTGCGTG CTTTTGCCCG CGATTCCGTG
CTGGTTTTTG TGCGCACAAG ACACGGTGCA CGCCGCCTGT GGCAGCAGCT GGTCAAATCG
GGCATAGAGG CGACCTGCCT GCAGGGCAAC CTTTCGCAGG GGCGTCGCAG GGCCGCGCTG
GAAGGTTTTC GCAGGGGGAC TTTCCGCGTT ATGGTGGCCA CGGATATCGC CGCGCGGGGT
ATAGATGTCT CGCAGGTGGG GTACGTGATC AATTACGATT TTCCGCCTTC GGTAGAAGCC
TGCGTGCACA GGGCAGGGCG CACCGGCAGA GCCAGCAATT CCGGAGTGGC GCTGACCTTT
GTGACGCAGG AAGATGAACC GCAGGTGCGC ACGCTGGAAC GGGTGCTTGG CGGTGCGTTG
TCGCGTTGGC ACGCGGAAGG CTTTGACTAC AGCGCGTTGC AGCGCACGGA GGCCGCACGT
CCGGCCCGCC TGCGCCGCGA GCCCCGCCCG CAGCGTGTGC AGCGCGTGCG CCGCCTGCTT
GAAGATGCAG CGCGCGAACA GATGGCGGCC GCCAGAAAGG TCGCTTCGCA TGCGGGGCAC
GGGGGTGACA TGCATCAGGA CGGGCAGCCG GTGAAGCCTG CGTTCCGTAT TGTCCCCAGA
GAAGCTCCCG CGCCGCTTAA GCCTAAACCG GGGCAGTATG TGATGAAACC CCAGCCGCCG
GTGATTATCC GCAAAAGACG CGGTGGTGCC TGA
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| Protein sequence | MIFSCRRFQR AHSALRCGGC PEKRTADVVR CVRRPDGVCC RSSAHELDHV KTGAAVSFAR
FSLHPALIEA VSARGFVNPT PIQEKALPPA LAGQDILGLA ATGTGKTAAF VLPLLHRLLL
QGESARGTLR ALVVAPTREL VAQIHEEVKT LARFCRLRSA TVYGGVGMHA QTVQLRTGVD
IVLACPGRLL DHVRRGHADL SHVDMLVLDE ADMMFDMGFL SDVREILHCT RVRKQTMLFS
ATMPAPLREL AEECLRQPVR IELDTCAIAP TVRHSLCPVP KHLKTPLLKY VLRAFARDSV
LVFVRTRHGA RRLWQQLVKS GIEATCLQGN LSQGRRRAAL EGFRRGTFRV MVATDIAARG
IDVSQVGYVI NYDFPPSVEA CVHRAGRTGR ASNSGVALTF VTQEDEPQVR TLERVLGGAL
SRWHAEGFDY SALQRTEAAR PARLRREPRP QRVQRVRRLL EDAAREQMAA ARKVASHAGH
GGDMHQDGQP VKPAFRIVPR EAPAPLKPKP GQYVMKPQPP VIIRKRRGGA
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