| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2370 |
|---|
| Symbol | |
|---|
| ID | 3757386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2391639 |
|---|
| End bp | 2394026 |
|---|
| Gene Length | 2388 bp |
|---|
| Protein Length | 795 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637783266 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_388862 |
|---|
| Protein GI | 78357413 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0114838 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTAA ACACCTGTAT GCGGCCTGAA ACGGCCGGAA TTATCCGCCG GTTGCGCCCG
CGCGCTTGCC CGGTGACAAA GGACGCCACC ATGCACCATT CGCTCAGCCT GCTTTTTGTC
ACCTGTTCGG AAGAACTGGC GGACGGCATA GTGCACAGCG CTTCGGAATG CGGTCTGCAC
CCCGCCTATT CTCTTGTGGG GTCGGCTCAG GAGCTTTCCC GCGCGCTTGC CGAAGAATCC
TGGGACATCA TTCTGGCCGA ACCCCATGTG GCGGGCATGC CGTGGCAGCA GATACTTGCG
GCCGTGCGCC GTGTGCACGA AGGGATTCCT TTTGTCCTTG TCATGCCTGC CCCCGACCCG
CAGGCCGCGG CGCAGGCCGT CCACGACGGT GCCGATGAAG TGCTGCTGCC TGCGGACTGG
CATACCGGCG CCGCCCTGCA GCGGCTGCGC AGTCAGGCAG TGCTGAGCCG CAGACAAGGT
GCCCGCCGCC GTTCACGCGC AGATGATGAA AAAGAATGGC GCGCGCTGGT CGAAAACACC
ATGGTCGGCA TGTTCCGCTG CCGCCCCTGG GGCGAGCTGG TACAGGTGAA TCCTGCTTTT
GCCGCCATAT TCGGCTACCG TTCCCCCCAA GAGCTGCTGA ATGCCCATGC CGGAAAAAAG
GGGCCCCATG TTCCGGCCGC AGAAATAAAA GAACTGCTGC CGGCACTGAG GAATGAAGGC
CTGCTGACAG AATACGAGAT GCACGCAGCA CGGCCCGACG GTTCCGGCGT ATGGCTTTCC
GTCAATGCCA GAACCATACG GGGGGCCGCC GGAGAAATTT CGGGCATAGA AGGCACGGTG
GAAGACATCG GCAACCGCAA GTCGGTCGAA AACATGATTG TCCGGGCAAA GCAGGAGTGG
GAAAAAACAT TCGACAGTGT ACCCGACATA ATCGTCCTGC TGGACAGCGA CCTGCACATA
AGGCGATGCA ACATGGCGCT GGGAACGCTG CTGGGCCGCC ATCCGCGCGA ACTGGTGGGA
CAGGACAGCC GCAAAACACT TTTCGACGGC GGCACACACG GCCCTGTGCT TGACTCGCTG
CCTGCGCTGA GCCGCGGACA AAGCCATACC GAAGAACTGC ACCTGCCCGC GCTGGGCGGA
CATTTTCTGA TAACCTTTTC GCCGCTGTTC ACCGGCACCG GATCAGATGC GGAACCGGAA
GGCACCGTAC TGGTGGCACG CGACATAAGC AGCCGCAAAC AGCTGGAAGC ACAGTTGCGC
CAGGCTCAGA AAATGGAGGC CATAGGCACG CTGGCAGGCG GAATCGCTCA CGATTTCAAC
AACATCCTCG GCGTGATGAT GGGCTATACT GAAATGAGCA TGGATGAAAC CACGGAAGGT
TCGGCCATGC AGCGGCGGCT GGACGCCGTA CTCTCTGCCG GAAGGCGCGC CCGCGACCTC
ATCCATCAGA TACTTACTTT CAGCAGACAC GAAGAGCCTT CGCGTCATCC GCTCAACCTT
GTTTCCCCCG TCAAGGAAAC GGTCAAACTG CTGCGGGCTT CGCTGCCGGC CAACATTGCC
ATCGACCTGC GTACAGACAC TGTGCCTCCC GTCAACGCAA ACCTGAGCCA GATTCAGCAG
GTGGTCATGA ACCTGTGCGC CAACGCAGCC CACGCCATGC GCGGCCCGGG CGGCAACCTG
CTGCTTGCGC TGGACAGCAC CCTGCTTACC GCCGAAGAAG CGCGCCCTCT TTCCGTCCCT
GCGGGCACGT ATGTCCGCCT GCGTGTGTCC GACACGGGGC ACGGTATCGA CCCGCAGATA
CTGCACAGCA TTTTTGACCC GTTTTTCACC ACAAAAAAAC CCGACGAAGG AACGGGCATG
GGGCTGGCGC TGGTGCACGG CATCATCACC GCGCACGGCG GTACGGTATC TGTCTCGTCC
GTACCCGGGC AGGGAACAGA CTTCACCATA CTGCTGCCCG CCACCGACGG ACAGAATGTA
TCGGAACCGG GCGGGTCACT GCGCCACGCG GGCAGCGGCA TTGTGCTGGT GGTGGATGAT
GAAAAAGCAC TGGCAGGCGT CATGGCCGAT ATGCTGCAAA GCATGGGATA CACCCCGCGC
ATAGCCGATT CGCCGGCTCA GGCGCTGCAC ATGGTAAGCC GCGCCCCGCA GGAATTTGCC
CTTGTGCTTA CAGACCAGAC CATGCCGGAC ATGACCGGAA CAGAGCTGGC GGCACGCCTG
CATGCGGTGC GCCCCGACCT GCCGGTCATT CTGTGCACGG GCTTCAGCGA GGGGCTTACG
CGTGAAGCCG CACGCAAGGC CGGAATCAGC GAACTGCTGC TCAAACCCGT ATTACGCGGC
GATCTGGCAA AGGCGCTGGC ATGTCTTGAA TTTGACTGCG GGCTGTGA
|
|---|
| Protein sequence | MPVNTCMRPE TAGIIRRLRP RACPVTKDAT MHHSLSLLFV TCSEELADGI VHSASECGLH
PAYSLVGSAQ ELSRALAEES WDIILAEPHV AGMPWQQILA AVRRVHEGIP FVLVMPAPDP
QAAAQAVHDG ADEVLLPADW HTGAALQRLR SQAVLSRRQG ARRRSRADDE KEWRALVENT
MVGMFRCRPW GELVQVNPAF AAIFGYRSPQ ELLNAHAGKK GPHVPAAEIK ELLPALRNEG
LLTEYEMHAA RPDGSGVWLS VNARTIRGAA GEISGIEGTV EDIGNRKSVE NMIVRAKQEW
EKTFDSVPDI IVLLDSDLHI RRCNMALGTL LGRHPRELVG QDSRKTLFDG GTHGPVLDSL
PALSRGQSHT EELHLPALGG HFLITFSPLF TGTGSDAEPE GTVLVARDIS SRKQLEAQLR
QAQKMEAIGT LAGGIAHDFN NILGVMMGYT EMSMDETTEG SAMQRRLDAV LSAGRRARDL
IHQILTFSRH EEPSRHPLNL VSPVKETVKL LRASLPANIA IDLRTDTVPP VNANLSQIQQ
VVMNLCANAA HAMRGPGGNL LLALDSTLLT AEEARPLSVP AGTYVRLRVS DTGHGIDPQI
LHSIFDPFFT TKKPDEGTGM GLALVHGIIT AHGGTVSVSS VPGQGTDFTI LLPATDGQNV
SEPGGSLRHA GSGIVLVVDD EKALAGVMAD MLQSMGYTPR IADSPAQALH MVSRAPQEFA
LVLTDQTMPD MTGTELAARL HAVRPDLPVI LCTGFSEGLT REAARKAGIS ELLLKPVLRG
DLAKALACLE FDCGL
|
|---|
| |