| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2316 |
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| Symbol | |
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| ID | 3757327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2332138 |
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| End bp | 2334360 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637783207 |
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| Product | RNA-binding domain-containing protein |
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| Protein accession | YP_388808 |
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| Protein GI | 78357359 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGCA CCCAGATACA ACCCGTAACC ACAGAGAACT TCATGTCGCA GCATATACAA
ATCCTCTCCG CAGAACTCGG CGTTCCGCGC TCCGGCATCA CCGCCGCCGC AGCCCTGCTG
GACGAAGGAG CCACAGTGCC CTTCATCAGC CGTTACCGCA AGGAAGCCAC CGGCGGGCTG
GATGAAACCG TCATCACCGC CATACGCGAC GGCATGACCA GACTGCGCGC TCTGGACAAA
CGTCGCGAAG CGGTCATTGC CTCGTTGCAG GAACGCGACC TGCTGACTGC CGAACTGCAC
GGTGCGGTTA TGCAGGCAGC CACCATGACC GCGCTGGAAG ACGTATACCT GCCGTACAAG
CCCAAACGCC GCACCCGTGC ACAGATGGCG CGGGAACGCG GACTGGAACC GCTGGCAGAC
CTGCTGATGC AGCAGCGCGG ACGCAGAGTG CACGACGATG CACTTGCATT TATCACTCCG
GACGGCACCC CCAAAGAGAC AGCAGTGCCC GATTCCGCAT CCGCCCTGGC AGGAGCCAGA
GACATAGTGG CCGAACGGAT AAGCGAAGAT ACTGCAGCGC GGCAGGCCCT CCGGCAGCTG
TTCCGCGAAA AAGGCATAAT AAGCTCCGCC GTAAGCAAAG GGAAAGAAGA GGAAGGCGCC
AAATTCCGTG ACTGGTTTGC CTGGTCGGAA CCTGCGGCCA AGGCTGCGGG CCACCGCATT
CTGGCCCTGC TGCGCGGTGA GCGTGAAGGT GTGCTGACGG TACGGCTGCG CCCTGACGAC
ACGGCTGCGC TGACCCTGCT CAAACGCCGT TTTCTGAAAA AACAGGTTCC GCTGCACATG
CAGGGATCTG AGGAAACCGA CAGCGGCAAT GTGGTACTGG CTGTTGAAGA CGCATGGAAG
CGTCTGCTGA TTCCCGCGCT GGAAACGGAA ACCATGCATT TTTTCCGTGA ACAGGCTGAA
GATCAGGCCA TCAGGGTATT CGCCGCCAAC TTGCGGGACC TGATGCTGGC ACCACCGCTG
GGGCAAAAAC GTGCGCTGGC CATGGATCCG GGCTTCCGCA CAGGGGTCAA AACCGTGTGT
CTGGATGAGC AGGGCGCCCT GCTGCATCAC CAGACAATTT ATCCGCATAC CGGAACGGGT
AAAGCGCAGG AAGCCGCGTC GGCTGTACGG CGCATGGCGG AACAGTTCGG CATAGAGGCC
ATTGCCATAG GCAACGGTAC AGCCGGACGC GAAACAGAGA CTTTTGTCAA GGGACTGGGG
CTGGCAGACC ATATTGCCGT TGTCATGGTG GACGAGGCAG GCGCCTCTGT CTACTCCGCC
TCGGAAACGG CCCGCAGGGA ATTTCCCGAC CACGATGTCA CAGTCCGCGG AGCGGTTTCA
ATCGGGCGCA GACTCATGGA CCCGCTGGCC GAACTGGTAA AAATCGACCC CAAAGCCATC
GGCGTAGGGC AGTATCAACA TGATGTGAAC CAGACCGCGC TGAAACAGGC TCTGGATGAT
ACCGTCATGT CCTGCGTGAA CCATGTCGGC GTGGAACTCA ATACAGCAAG CGCGGAACTG
CTTGCCTATG TGTCCGGTCT CGGGCCGGCT CTTGCCAGCG GCATTGTGGC TTACCGCACT
CAGAACGGTC CGTTCAAAAG CCGCAGCCAG CTGCTGAAAG TGCCCCGGCT GGGACCGAAG
GCATTTGAAC AGGCAGCGGG GTTTCTGCGC ATAGGCACGG CCCTGCACGA CGGCAACCCG
CTGGACGCCA CAGCGGTGCA CCCCGAAAGC TACCCCGTTG TGGAACGCAT GGCTGCAGAC
GCCGGCACCA CCGTCGCCAG CCTCATTGCC GATGCGGGGC TGCGCGGGGC CATCCGCCCC
GAAGCGTATG TCACAGACAC CACGGGGCTG CCCACATTGC TGGATATTGT GAACGAACTG
GCAAAACCCG GACGTGACCC CAGGCCGGCC TTCGAGCTGT TCCGCTACGC CGATGTGCAT
ACACTGGATG ATCTGCAGGA AGGCATGGTG CTGCCGGGCG TGGTCACCAA TGTGACCGCT
TTCGGTGCGT TTGTGGATAT AGGCGTACAT CAGGACGGAC TGGTGCATAT AAGCCAGCTG
GCAGACAAGT TTGTCCGTGA TCCTGCAGAG GTTGTCAGGG TGCGTCAGCA GGTGCAGGTG
CGGGTGCTTG AAGTTGATCA TAAGCGCAGA CGTATCAGCC TGAGCATGAA ACAGTCCGTC
TGA
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| Protein sequence | MSSTQIQPVT TENFMSQHIQ ILSAELGVPR SGITAAAALL DEGATVPFIS RYRKEATGGL
DETVITAIRD GMTRLRALDK RREAVIASLQ ERDLLTAELH GAVMQAATMT ALEDVYLPYK
PKRRTRAQMA RERGLEPLAD LLMQQRGRRV HDDALAFITP DGTPKETAVP DSASALAGAR
DIVAERISED TAARQALRQL FREKGIISSA VSKGKEEEGA KFRDWFAWSE PAAKAAGHRI
LALLRGEREG VLTVRLRPDD TAALTLLKRR FLKKQVPLHM QGSEETDSGN VVLAVEDAWK
RLLIPALETE TMHFFREQAE DQAIRVFAAN LRDLMLAPPL GQKRALAMDP GFRTGVKTVC
LDEQGALLHH QTIYPHTGTG KAQEAASAVR RMAEQFGIEA IAIGNGTAGR ETETFVKGLG
LADHIAVVMV DEAGASVYSA SETARREFPD HDVTVRGAVS IGRRLMDPLA ELVKIDPKAI
GVGQYQHDVN QTALKQALDD TVMSCVNHVG VELNTASAEL LAYVSGLGPA LASGIVAYRT
QNGPFKSRSQ LLKVPRLGPK AFEQAAGFLR IGTALHDGNP LDATAVHPES YPVVERMAAD
AGTTVASLIA DAGLRGAIRP EAYVTDTTGL PTLLDIVNEL AKPGRDPRPA FELFRYADVH
TLDDLQEGMV LPGVVTNVTA FGAFVDIGVH QDGLVHISQL ADKFVRDPAE VVRVRQQVQV
RVLEVDHKRR RISLSMKQSV
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