| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2214 |
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| Symbol | |
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| ID | 3757224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 2254144 |
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| End bp | 2255463 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637783104 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_388706 |
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| Protein GI | 78357257 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0578484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGATC CCACGATTGC GGGTATTTGC GGCATTGCTG CCATGATGGT GCTTTTCATG
CTGCGCATGC CGGTGGCTTA TGCCATGCTG CTGGTGGGGG TTGCCGGGTT CAGTATGCTT
ACCAGCGTCA CCGGCGGGCT GAACATGCTG GGGCGGTCGG TATATTCCAC GTTTGCCTCG
CACGAGCTGA GCACCATCCC TTTGTTCATT CTCATGGGGC AGATTGCTTT CAATGCGGGT
ATAAGCCGGC GGCTTTATGA CACCGCGTAT TGTTTTTTGG GCCATGTGCG CGGCGGGCTG
GCCATGGCCA CGGTTTCCGC CTGTACGGCA TTCGGCGCTG TCTGCGGATC CAGTCCGGCC
ACGGCGGCCA CCATGGCCAC AGTGGGCCTG CCCGAGATGA AGCGCTTCGG ATATTCGGAC
GAACTGGCCG CCGGCGCCGT GGCTTCCGGC GGCGGGCTGG GCATGATCAT GCCGCCCAGT
GTTGTTCTGC TGGTTTACGG AGTGCTCACA GAGCAGTCCA TAGGCGCTCT GTTCGTCGCC
GGTATTCTGC CCGCCTTGCT GCTTACCTTG CTTTTTATCG CGGCGGTTGC GGTGCAGTGC
CTGCTGTACC CGCAGCACGG ACCGGCAGGC CGGCGTTCGT CATGGCGTTG CCGTCTGTGT
TCACTTATGG GACTGGTGGA CACTCTGCTT GTTTTTGCGC TTGTCATCGG CGGCATGTTC
TACGGCTGGT TCACCCCCAC GGAGGCTGCT TCCATCGGCG TGCTCGGGGT GTTTGTGCTT
GCCGTATCCA GAGGGCATCT GGGATGGCGG GGTTTTGTCA AAGCCGTGGA TGAGACCCTG
CGCACATCAT GCATGGTCAT GCTGCTGATA GCCGGTGCCA CCGTGTTCGG CAAATTTCTT
GCCGTGACCC GTATTCCTTT TGACATTGCC GGCTGGGTGG GTGGTTTTGA TCTGCCGGCC
TTTGCCGTTA TGGGACTTGT GGTGGCCGTG TACTTTGTGG GCGGCTGCTT TATGGATTCA
CTGGCGCTGG TCATGCTGAC CATACCGGTG TTCTATCCTC TGGTGCTCAA TCTGGGGTAC
GACCCTGTCT GGTTCGGCAT CATCATTGTG CTGGTAACTG AAATGGGGGT CATCACTCCG
CCGGTGGGTA TAAATGTCTA TGTTGTGTAC GGCATTGCCC AGCAGGTTGT TCCGGGCGGT
ATCGCTCTCG AGAGTGTGTT CAAGGGGGTT CTGCCTTTTC TTGTGGCGGT GATTGCGGGC
ATTGCCCTGC TGCTTTGCTT TCCGCAGATT GTCACCCTGT TGCCATCGCT GATGTATTGA
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| Protein sequence | MMDPTIAGIC GIAAMMVLFM LRMPVAYAML LVGVAGFSML TSVTGGLNML GRSVYSTFAS
HELSTIPLFI LMGQIAFNAG ISRRLYDTAY CFLGHVRGGL AMATVSACTA FGAVCGSSPA
TAATMATVGL PEMKRFGYSD ELAAGAVASG GGLGMIMPPS VVLLVYGVLT EQSIGALFVA
GILPALLLTL LFIAAVAVQC LLYPQHGPAG RRSSWRCRLC SLMGLVDTLL VFALVIGGMF
YGWFTPTEAA SIGVLGVFVL AVSRGHLGWR GFVKAVDETL RTSCMVMLLI AGATVFGKFL
AVTRIPFDIA GWVGGFDLPA FAVMGLVVAV YFVGGCFMDS LALVMLTIPV FYPLVLNLGY
DPVWFGIIIV LVTEMGVITP PVGINVYVVY GIAQQVVPGG IALESVFKGV LPFLVAVIAG
IALLLCFPQI VTLLPSLMY
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