| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2161 |
|---|
| Symbol | |
|---|
| ID | 3757171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 2205624 |
|---|
| End bp | 2206583 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637783051 |
|---|
| Product | M48 family peptidase |
|---|
| Protein accession | YP_388653 |
|---|
| Protein GI | 78357204 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.117375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACACG AGGGGTTCCG CCACGGGAAT CTGATACAGA CAGTGCTGCT GGTGGCAGGG
ATGCTTGCTC TGCTGGCATT GACAGGATGG ATACTGCTGG GCGACGGAGG CGCCGTGTGG
GCTGTCGCCG CGGCAGGCGC GGCCCTGTTG TGGCTGCCGT CTGTGTCGCC TGCCATTCTG
CTGCGCATGT ACAGGGCAAG ACCACTGCGC AGTGAACATG CGCCCGCAGT GTACCATGCT
CTGGCAGAAC TCAGCCGCAG GGCGGGGCTG GAGCATCTGC CGGTGCTGTA TCATATACCT
AGCACGGTGC TTAATGCCTT TACCGTCGGC AGCGGAAAGC ATGCAGCCAT AGCTGTTTCC
GACGCTTTGC TGCGTAACCT GACCATGCGC GAACTGATTG CCGTGCTGGC GCATGAGGTG
TCACATATCG CGGGTGCGGA CACCCGTGTG ATGACTCTTG CCGATGTTGT CAGCAGGGTG
ACGGCGTTGT TTTCCACTGC GGGCAAGATT CTGTTGCTGC TCAACATTCC GCTGCTGCTT
GCCGGAGAGG TCACTGTTTC GTGGCTGCTG GTGGTGCTGC TTATTCTTGC GCCCCATATG
GCCATGTTAC TTCAGCTTGC GTTGTCGCGG ACGCGCGAGT TTGATGCCGA CGCCATGGCT
GCACGGCTCA GCGGCGACCC GCAGGGACTG GCCATGGCGC TGCAGCGTCT GGAGCGTTCC
GGGGCCGGAC TTTGGGAGCG TATGCTGGCA CCGGGCAGAA GAGTGGAAGA ACCTTCTTTT
TTACGGACTC ATCCGCCCAC GCATGAGCGG GTGAACAGGC TGATGGCTGT TGCAGGCCGG
ATGCACACGC AGGGCGGCAG CGCACAGGTG CCGCTCTATG TCCGGTACAC GCAGCCGGTG
CAGGTGCCGG TCCGGCAGAT ACTGCGCCCC AGATGGCGGT TGGGTGGAAT ATGGTACTGA
|
|---|
| Protein sequence | MLHEGFRHGN LIQTVLLVAG MLALLALTGW ILLGDGGAVW AVAAAGAALL WLPSVSPAIL
LRMYRARPLR SEHAPAVYHA LAELSRRAGL EHLPVLYHIP STVLNAFTVG SGKHAAIAVS
DALLRNLTMR ELIAVLAHEV SHIAGADTRV MTLADVVSRV TALFSTAGKI LLLLNIPLLL
AGEVTVSWLL VVLLILAPHM AMLLQLALSR TREFDADAMA ARLSGDPQGL AMALQRLERS
GAGLWERMLA PGRRVEEPSF LRTHPPTHER VNRLMAVAGR MHTQGGSAQV PLYVRYTQPV
QVPVRQILRP RWRLGGIWY
|
|---|
| |