Gene Dde_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_2120 
Symbol 
ID3757128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp2169654 
End bp2170094 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content56% 
IMG OID637783008 
Productribose-5-phosphate isomerase 
Protein accessionYP_388612 
Protein GI78357163 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00298451 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGC AAGTAATCAT CGGCTCCGAT CATGCCGGTT TCAGCCTCAA GGAACTTCTT 
GTTTCTGAAC TTACCAAAAG CGGGTACGAT GTACACGACA TGGGACCGGC AACCGCGGAA 
AGCTGTGACT ATCCGCTTTT TGCGCAGAAA GTATGCGAAC GGGTTCTGCA GCAAAAAGCA 
CAGGGAATTC TCATCTGCGG AACCGGCATA GGCATGTCCA TGGCTGCCAA CCGCATTGAC 
GGCATACGCG CCGCACTCTG TACCACCGAA TTCCATGCCA GGGCCACCCG TCTGCACAAC 
AATGCCAATG TTCTCTGTCT GGGCGAACGC GTGACCGGCC CCGGTGTTGC ACTTGAGCTT 
GCCAGGCTTT TTCTTGAAAC CGAGTTTGAA GGCGGGCGGC ATCAGCGCCG CATCGACCTG 
TTTGATTCTG CCAGCGCCTG A
 
Protein sequence
MAKQVIIGSD HAGFSLKELL VSELTKSGYD VHDMGPATAE SCDYPLFAQK VCERVLQQKA 
QGILICGTGI GMSMAANRID GIRAALCTTE FHARATRLHN NANVLCLGER VTGPGVALEL 
ARLFLETEFE GGRHQRRIDL FDSASA