Gene Dde_1979 details

Gene Information

• Locus tag: Dde_1979
• Symbol: mgsA
• ID: 3756985
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: +
• Start bp: 2025364
• End bp: 2025807
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637782865
• Product: methylglyoxal synthase
• Protein accession: YP_388471
• Protein GI: 78357022
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1803] Methylglyoxal synthase
• TIGRFAM ID: [TIGR00160] methylglyoxal synthase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00620313
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGGCC AGCGTAACAT CGGCATGGTG GCGCATGACG AACGCAAAGA AGACCTGCTG 
GACTGGGTGC AGCACAACCT GCAGGCTCTT ATTCCGCACA GGATATTTGC CACCGGCACC 
ACTGGCGGGC TGTTGCGTCA GCGCTTCGGC GACCTGACCA TAACCCCCAT GAAAAGCGGC 
CCGCTGGGCG GAGACCAGCA ACTGGGTTCC ATGATTGCCG AAGGCAGGCT GGATATGCTT 
TTCTTTCTCA TCGACCCCAT GGCACCTCAT CCTCATGATG TTGACATCAA AGCACTGCTG 
CGACTGGCAG TGCTGTATAA CATCCCTGCA GCCTACAATC GCTCCACAGC GGACTTCCTT 
ATTACCAGCC CGTTTATGAC CGGAGAGTAT ATTCCTGAAA TAAAAGATTA TACTCCGTAC 
GTGAAGCGTC TTGGCGCTAA ATAG 

 

Protein sequence

MKGQRNIGMV AHDERKEDLL DWVQHNLQAL IPHRIFATGT TGGLLRQRFG DLTITPMKSG 
PLGGDQQLGS MIAEGRLDML FFLIDPMAPH PHDVDIKALL RLAVLYNIPA AYNRSTADFL 
ITSPFMTGEY IPEIKDYTPY VKRLGAK