Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1888 |
Symbol | |
ID | 3756891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1940027 |
End bp | 1940488 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637782772 |
Product | hypothetical protein |
Protein accession | YP_388380 |
Protein GI | 78356931 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02241] conserved hypothetical phage tail region protein |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0320965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGCG GAAATATGCC CAAGAGCCTT TACCAGAACT GGCAGTTCGC CATCGAGGTA AACGGCTTCG ACGTGGCCCT GTTCCACAAG GGACAGGAGC CCAAAACAGA ATTCGAGGAA GTGGCCTTTG CCCCGGCCGG TTCGATGTTC GACCAGAAGG TGGCGGGGCG GGTCAAGTTC GAGGACATCA CCCTCGAGAA AGGCAACCTG CAGGACGGCT CCGACGAGGC GGCCCGCGAA TGGATCAAGA AACAGGTGGA CGTGAACGCC GTCACCGGCG GTCTTCCGGC CGACTACATG CGCGACATCG ACGTTGTCCG CTACGACCGC ACCGGCAACG AGACCCGCCG CTGGACCCTG CACGGGGCCT GGGTCAAGGC GCTCGAATAC GACGAGCTCG AAGGCGGCAA CACCGAAAAC ACCATCGAGA AGCTGACCAT CTGCTTCCAG TATTGGACCT AA
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Protein sequence | MRSGNMPKSL YQNWQFAIEV NGFDVALFHK GQEPKTEFEE VAFAPAGSMF DQKVAGRVKF EDITLEKGNL QDGSDEAARE WIKKQVDVNA VTGGLPADYM RDIDVVRYDR TGNETRRWTL HGAWVKALEY DELEGGNTEN TIEKLTICFQ YWT
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