Gene Dde_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1888 
Symbol 
ID3756891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1940027 
End bp1940488 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID637782772 
Producthypothetical protein 
Protein accessionYP_388380 
Protein GI78356931 
COG category 
COG ID 
TIGRFAM ID[TIGR02241] conserved hypothetical phage tail region protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0320965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGCG GAAATATGCC CAAGAGCCTT TACCAGAACT GGCAGTTCGC CATCGAGGTA 
AACGGCTTCG ACGTGGCCCT GTTCCACAAG GGACAGGAGC CCAAAACAGA ATTCGAGGAA
GTGGCCTTTG CCCCGGCCGG TTCGATGTTC GACCAGAAGG TGGCGGGGCG GGTCAAGTTC
GAGGACATCA CCCTCGAGAA AGGCAACCTG CAGGACGGCT CCGACGAGGC GGCCCGCGAA
TGGATCAAGA AACAGGTGGA CGTGAACGCC GTCACCGGCG GTCTTCCGGC CGACTACATG
CGCGACATCG ACGTTGTCCG CTACGACCGC ACCGGCAACG AGACCCGCCG CTGGACCCTG
CACGGGGCCT GGGTCAAGGC GCTCGAATAC GACGAGCTCG AAGGCGGCAA CACCGAAAAC
ACCATCGAGA AGCTGACCAT CTGCTTCCAG TATTGGACCT AA
 
Protein sequence
MRSGNMPKSL YQNWQFAIEV NGFDVALFHK GQEPKTEFEE VAFAPAGSMF DQKVAGRVKF 
EDITLEKGNL QDGSDEAARE WIKKQVDVNA VTGGLPADYM RDIDVVRYDR TGNETRRWTL
HGAWVKALEY DELEGGNTEN TIEKLTICFQ YWT