Gene Dde_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1868 
Symbol 
ID3756871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1918124 
End bp1921672 
Gene Length3549 bp 
Protein Length1182 aa 
Translation table11 
GC content64% 
IMG OID637782752 
Producthypothetical protein 
Protein accessionYP_388360 
Protein GI78356911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.71952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCT CACGCGAGAC ATTCGACCCG ACCAAGAATT ACAAGCGCAT CCGTTACCAT 
CAGGATCGCG ACCTGCTGGA TTCCGAACTC AACGAGCAGC AGGACATCAT CAACCTGGAG
CGGCGCAAGA TCGCCGACAT CCTGTTCAAG GAAGGCTCCA TCATCATGGG CCTCGAGGTC
AGCGCGACCG CCAACGTCCT GACCCTGGCC CCGGGCGTGG TCTACATCGA CGGCCATCTG
GAACAGGTGA GCGGCGCGAC CCTGACCTAT GACCCGGCCA CCACCAGCGG GGCCGATTAC
GTTTACGTGG AGCTGCTGAA GTACAACTAC GGCTACACCC AGGACCCGGC CCTGATCAAT
CCGGCCACCG GCGAGCCCAC CGCCGAACGG GAAAAATGGG TTCTCTCTCT CAAGGCGACG
GATACCAGCG GCCAGACGCT GCCCAACAAC GTGACCGAGC GTCGGGTGAT CCCGATCTAC
AAGTTCGACC GCGAGAGCGG AGACGTCACG CCGACGGTGC AGGAGAAGTC CAACCTATAC
CTGCGGGATC TGCTGGGCAC GCTGCCGGGC AGCCGGATTA CCGTCTCCTC GATCACCGAG
GACCAGCTCT CATTCGCCGC CGCCGAGGGT CTCAACTCAC TGATTCAGAA CCTGGCCGAG
CGCACCTTCG ACCAGGCCGG AAGCTACCTG GTGCGTGGCT TTGACACCTT TATCGGCGGC
GTCGACGACG ACAGCGTGGA GGCGATCACC AACGCCGGAC GCGCCTACAT CCAGGGCTTC
CGGCATCAGC GCGATCTGCC CACCTCGACC CTGGTGCCCA AATCCATCGC CACCAAGTCG
GTGCGCGGCG AGCAGAAGAC CTTCGACATC AACAAACGCC GCTATCCAGT CAACTCCACG
CCGCTCAAGG AGACGACCCA GGTGGAGGCC ATCGTCGAGA TCACCCGCAA CGTCACTCGC
GGCTCGGTGG GCGGTGGCGA AGACCTGCTC GACCCCAATC CGGTAGTGGA CATCCTCGAG
GTCAGCCAGG GAGCGACCAT CTTCCAGGAG GGCGTGGACT GGCAGCAGTC GGGCAACCAT
GTCGACTGGC TCGGCTCCGG TAACGAACCG GCCATCGGCA CCACCTATAC GGTGCGCTGG
ACCTACACCA AGCAGATGAT CAAGGGCACC GACTACGTGG ACAGCGGCTG GTTCGGGCAG
GCCAACCATC CGGCGGCCGG AAACTATTTC TATCTGGTGA CCGCCTACAA CGCCACCGGC
GAGACGGCCT TCAACGCCGC TGCGGTCATT GCCCGGGCCA CCGCCGCCGG TGAGATGAAC
AAGCTCTCCT GGCTGCCGGT CAGCGGCGCG ACCGGTTATC GCGTCTACCG GGCCGCCACC
AACGGCGCAC GCACCGACTA CAAGCGCCTG ATGGAACTGG GCAGCGAGGC GCTGTCCTAC
GTCGACGACG GCGTCGAGGA GACCGGCACC GTTTCGCCTC CGGCCACCAA CACGGCCGGA
CTCACCATGT CGCCGGTGCA GATCGAGCTG GGCAACCTCA ACGTGATCAA CTTCGGGCGC
GGCAGCCTCG GCGACCAGCC GGTGAACGGT TCCAACTGCA GCCTGGACTA CGACTATTAC
CTCGGCCGCC GCGACATCGT TTACGCCACC ACCACCGAGA TCAAACGGCT GGAAGGGGCT
CCTGCCGATT TTCCGAAGCT GCCCATCGTG CCGGAAAACG CCCTGGGGCT GTGCAGCATC
GACTGCCCGC CCAACTCCAC CGACATGGAG ATCCGCAACT TCGGCCTGAC CCGCATCACC
ATGGATCAGA TTCACGACAT CATTCAGGAC GTCGAGGACC TGAAGTACAA CGATGCCCAG
TACCAGATGA ACAACGAGCT GCAGAACCGG GACGCCCAGA CCAAGAAAGG CATCTACTCG
GACGACTTCT CGAACACCGC CCAGTCGGAC ATCTACCACG CCGAATGGGA CGCCCGGGTG
AACGAGATCG CCCGCTTCGT CGCGCCGGAT CGCATTCCGC ACTCCACCGT GCTCTCGGTC
GATCAGGCGG GCAGCAACGC GAGCTTCTTC GGCAGTCTGG CGCTGCTGCC GGGCAACGAG
ACCGTGCTGG TGGAGCAGAA CGACTGGTCC GAAGAGCGCA ACATCAACCC CTACGCGGTG
TTCGACAAGC CCCCGGCCAT GCTGCAGATC ACGCCCAACC TCGGGCGGCG CGGCCAGACC
GGCATCGCCG TCACCGGCAT CAACTTCACC CCGAGCAAAT CCGGCATCGT GCTGCGCTAC
GACGGCCAGG TGATGGCCAG CAACCTGCTC AGCGACGAGG CCGGTCGGGT CAGCGCCTCC
TTCACCATTC CGACCAACGC CCGCAACGGG AACCGCATCG TGGAGATGGC CGACGGCGTC
TACTCGGCCC GGGCCAGCCT GCAGATCAAC GATCCGCTGG TCATCACCCG CATCGAGCGC
ATCATCGAGA ACCGCATCAT CCGCGTGCCC GTGGTGCAGG TGGTCTGGCG CACCCAGACC
ATCTTCGTGC CCCGTGACCC GCTGGCCCAG ACCTTCAGCT TTACCCAAAA CCAGGTGATC
TCCAGCATCG GTCTGCAGTT CACCGCCAGG GACCCGAGCA TTCCGGTCAC GGTGCAGATT
CGCGGCGTTA CCACCGGTCT GCCCAACGGC GTGGTGTTCG CCGAAAAGGT ATTGGCCCCG
AACGAGATCA GCCTGAGCGG TGAGACCCGC ATTCGCTTCG ACGACCCGTT CTACGCCGAG
GCCAACACCA GCTACGCCGT GGTGCTGCTG ACCAACAGCA CCAATTACAA GGTGCGCACC
GCCACCCTCG GCAAGATGGG CCGCTGGGGC ATCATCACCC GGCAGACTTA CATGGAGGGA
GTGCTGCTGG AGAGCTCCAA CGCCGAGACC TGGACGCCGC TCAACGGCTC CGACCTGGCG
ATGAAGATCT ACGGTTACAA CTTCCAGTCC GAGGGGATGA TCCGCTTCCA GCCGATCACC
GGCGTGCAGT TCTCCGACAT CAACCTCGAC GAATACTCGG CCATCCCGCA GGGCACCGGC
CTCGACTGGG AATACTCCAC CGACGGCGGC GTGACCTGGG ACGCCATGGT TCCCGCCGAG
GAGGAACGGC TGCCCAACCT CGCCACCCGG GTCCAGATCC GCGTGCGCCT GAGCAGCTCG
CTCTCGAACG ACACCCCGGC CATCAACTTC CGCGACGTCA ACCTGGTGGG CTATCTCAAC
AAGACCACCG GGGCCTACCT GACCCGCGAG AACGAGCTGA CCCAGGGAGT GGAATCGACC
AAGGCCTATG TGCAGATGCA AATCCCCAGC GGCACCACCC TGCAATGGTT CGCCAGCAAC
GACGGCGGCT TGACCTGGGA GGCGATGACC ATCCAGGACA CCCGGCCCAT CGACGAGAAC
TGGACCGAGT ACACCCTGGT GCGCACCTTC ACCGACAACA CCGGGAACAA GGTCCGCTAC
AAGGCCGAGA TGACCGGCAC GCCGCTGATC TACCCGCGCA TCCATTCGCT GGGCGCGACC
CTGAGCTAA
 
Protein sequence
MSISRETFDP TKNYKRIRYH QDRDLLDSEL NEQQDIINLE RRKIADILFK EGSIIMGLEV 
SATANVLTLA PGVVYIDGHL EQVSGATLTY DPATTSGADY VYVELLKYNY GYTQDPALIN
PATGEPTAER EKWVLSLKAT DTSGQTLPNN VTERRVIPIY KFDRESGDVT PTVQEKSNLY
LRDLLGTLPG SRITVSSITE DQLSFAAAEG LNSLIQNLAE RTFDQAGSYL VRGFDTFIGG
VDDDSVEAIT NAGRAYIQGF RHQRDLPTST LVPKSIATKS VRGEQKTFDI NKRRYPVNST
PLKETTQVEA IVEITRNVTR GSVGGGEDLL DPNPVVDILE VSQGATIFQE GVDWQQSGNH
VDWLGSGNEP AIGTTYTVRW TYTKQMIKGT DYVDSGWFGQ ANHPAAGNYF YLVTAYNATG
ETAFNAAAVI ARATAAGEMN KLSWLPVSGA TGYRVYRAAT NGARTDYKRL MELGSEALSY
VDDGVEETGT VSPPATNTAG LTMSPVQIEL GNLNVINFGR GSLGDQPVNG SNCSLDYDYY
LGRRDIVYAT TTEIKRLEGA PADFPKLPIV PENALGLCSI DCPPNSTDME IRNFGLTRIT
MDQIHDIIQD VEDLKYNDAQ YQMNNELQNR DAQTKKGIYS DDFSNTAQSD IYHAEWDARV
NEIARFVAPD RIPHSTVLSV DQAGSNASFF GSLALLPGNE TVLVEQNDWS EERNINPYAV
FDKPPAMLQI TPNLGRRGQT GIAVTGINFT PSKSGIVLRY DGQVMASNLL SDEAGRVSAS
FTIPTNARNG NRIVEMADGV YSARASLQIN DPLVITRIER IIENRIIRVP VVQVVWRTQT
IFVPRDPLAQ TFSFTQNQVI SSIGLQFTAR DPSIPVTVQI RGVTTGLPNG VVFAEKVLAP
NEISLSGETR IRFDDPFYAE ANTSYAVVLL TNSTNYKVRT ATLGKMGRWG IITRQTYMEG
VLLESSNAET WTPLNGSDLA MKIYGYNFQS EGMIRFQPIT GVQFSDINLD EYSAIPQGTG
LDWEYSTDGG VTWDAMVPAE EERLPNLATR VQIRVRLSSS LSNDTPAINF RDVNLVGYLN
KTTGAYLTRE NELTQGVEST KAYVQMQIPS GTTLQWFASN DGGLTWEAMT IQDTRPIDEN
WTEYTLVRTF TDNTGNKVRY KAEMTGTPLI YPRIHSLGAT LS