| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1859 |
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| Symbol | |
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| ID | 3756862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1907890 |
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| End bp | 1910883 |
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| Gene Length | 2994 bp |
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| Protein Length | 997 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637782743 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_388351 |
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| Protein GI | 78356902 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.397249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGA CTGACACCAG CGAAAAGGGC CTGGAATCGA TTATCGTCGC CTCCCTTGTG
GAGGATGCCG GATACGTTCA GGGTGATCCG CAGGACTACG ACCGGGAACA CGCTGTCGAC
CTGGCCAAAC TACTGCAATT CCTCGCCGCC ACCCAACCAG ATACCTATGA GGCTCTCGGC
ATCGACGAGG AAGGCCCCAA GCGCACCCAG TTTCTGCACC GCCTGCAGGG CGAAATCGCC
AAACGCGGCG TGGTAGACGT GCTGCGCGGC GGCATCAAGC ACGGCCCGGC CCATGTGGAC
CTTTTCTACG GCACGCCGAC GCCGGGCAAC GTGAAGGCGG CCGAACGGTT CGCGGCCAAC
ATCTTCAGCG TCACCCGCCA GCTTCGCTAC AGCCGCAACG AGACCGCGCT CTCCCTCGAC
ATGGCCGTGT TCATCAACGG CCTGCCCATC GCCACCTTCG AACTCAAGAA CAAACTCACC
AAGCAGACGG TGCTCGATGC CGTGCAACAG TACCAGCGCG ACCGCGACCC GAAGGAGCTG
CTGTTCCAGT TCGGCCGCTG CGCCGTGCAT TTTGCCGTGG ACGATCACGA GGTGCGTTTC
TGTACCCACC TCAAGGGCAA GGGCTCGTGG TTTCTGCCCT TCGACAAGGG CTACAACGAT
GGCGCGGGCA ATCCGCCCAA CCCGGCCGGG CTCGCCACCG ACTACCTTTG GAAGGAGACC
CTCTCCAAGG AGGGTCTGAC CGACATCCTG GAAAACTACG CTCAGGTGGT GGAGGAAAAA
GACGAGAAGA CCGGCAAAAA GAGGTACAAG CAGATATTCC CTCGCTACCA CCAGTTGAAG
GTGGTGCGCA TGCTGCTGGC CAATGCCGCT GAGAGCGGCA TCGGCAGGCG CTACCTGATC
CAGCACTCGG CGGGCAGCGG CAAAAGTAAC TCCATCGCCT GGCTGGCGCA CCAGCTTGTG
GGGCTGGAAC ACGAGAGCAA GGCGTTGTTC GACTCGGTGA TCGTGGTCAC CGACCGACGG
GTGCTCGACA AACAGATCCG CGACACCATC AAGCAGTTCG CCCAGGTCTC CGCCACAGTC
GGCCATGCCG AACACTCCGG CGACCTACGC AAATTCCTCA AGGCCGGGAA GAAAATCATC
ATCACCACCG TGCAGAAGTT TCCGTTCATC CTCGACGAGA TCGGTGACGA ACACCGCAAG
AGCAAATTCG CCATCATCAT CGACGAGGCC CATTCCAGCC AGGGCGGCAA AACCACCGCT
GCCATGAACC GCGTGCTGGA GGAGACCGCG CCCTATGGCG GCTCTGATGA CGAGGAGGAA
GAGACGGTCG AGGACAAGAT CAACAAGATC ATGGAAGGCC GGAAGATGGT GACCAACGCC
AGCTACTTCG CCTTCACCGC GACCCCCAAG AACAAGACCC TGGAGATCTT CGGCGAGCCG
GACCCGCAGC CGGACGGCAC CGTGAAGCAT CACCCGTTCC ACAGCTACAC CATGAAGCAG
GCCATCCAGG AGGGTTTCAT CCTCGATGTG CTGAAGAACT ACACCCCGGT GGAGAGCTAT
TACCGCCTGG CCAAGACCGT GGAGGACGAC CCGCTCTTCG ACGCCAACAA GGCCCAGAAA
AAGCTGCGCC GCTATGTGGA GTCCCACGAG CACGCCATCC GCGAGAAGGC GGAGATTATG
GTGGACCATT TCCACGCCCA GGTGATCGGC CACCGCAAGA TCGGCGGCCA TGCCCGGGCC
ATGGTCATCA CCAACGGTAT CGAGCGGGCC ATCCAGTATT TCCACGCCTT CAGGGACTAT
CTCAAAGAGC GCAAAAGCCC TTACGCACCC ATCGTGGCTT TTTCCGGGGA GCACGAGTAC
GGCGGCAAGA AAGTCACCGA GTCGACGCTG AACGGCTTTC CCAGCAGCCA GATCCCGGAC
AAGGTACAAC AGGACCCGTA CCGCTTCCTG ATCGTCGCCG ACAAGTTCCA GACCGGCTAC
GACGAACCGC TGCTGCACAC CATGTACGTG GACAAGGCGC TCTCCGGCAT CAAGGCGGTG
CAGACCCTCT CGCGGCTCAA TCGCGCCCAT CCGCAGAAGC ACGACACTTT TGTGCTCGAT
TTCTACAACG ACTCGGAGAC CATCCAGAGG TCGTTCGAGC CCTATTACCG CACCACCATC
CTCAGTGACG AGACCGACCC CAACAAGCTC CATGATCTGA AGTCGGATCT GGACGGCTAC
CAGGTCTATT CGCAGGTACA AATCGACGAC CTGGTGGGGC TCTATCTGAA CGGCGCGGAC
CGCGACAAGC TCGACCCGAT CCTGGATGCC TGCGTGGCCA CCTACAACGC CGATCTCGAT
GAGGACGGCC AGGTGGACTT CAAAGGCAAA GCCAAGGCCT TCGTCCGCAC CTACGGCTTT
CTGTCCTCGA TCCTGGCGTA CTCGAATGCC GACTGGGAAA AGCTGTCGAT CTTCCTGAAC
TTCCTGATCC CGAAACTCCC CGCGCCCAAG GAAGAGGACC TGTCCCGGGG CATCCTGGAG
GCCATCGACA TGGACAGCTA CCGTGTCGAG GTGAAAACCA GCCTGAAGAT CGGCCTTCCG
GATCAGGATG CCGAAATCGG ACCGGTGCCG ACCACCGGTA GTGGCCGCAA ACCGGAACCG
GAGCTGGACC AACTGAGCAA CATCATCAAG GCGTTCAACG ACCAGTTCGG CAACATCGAT
TGGAAGGACG GCGACAAGAT CCGCAAGGTC ATTGCCGAGG AGATCCCGGC CAAGGTCGCG
GCGGACGCGG CCTACCAGAA CGCCATGAAG AACAACGACA AGAAGACCGC CCGGATCGAG
CACGACGCCG CGCTGCAACG CGTCATGATC GACCTCTTGT CCGACCACAC CGAGCTGTTC
AAGCAGTTCA GCGACAACCC GTCGTTCAAG AAATGGCTTG GCGACACCAT CTTCGGCGTG
ACCTATCAGC AACAGGCCGA ACAATCCGCA ACGGGGGCGA GCCATGGACG TTAA
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| Protein sequence | MKPTDTSEKG LESIIVASLV EDAGYVQGDP QDYDREHAVD LAKLLQFLAA TQPDTYEALG
IDEEGPKRTQ FLHRLQGEIA KRGVVDVLRG GIKHGPAHVD LFYGTPTPGN VKAAERFAAN
IFSVTRQLRY SRNETALSLD MAVFINGLPI ATFELKNKLT KQTVLDAVQQ YQRDRDPKEL
LFQFGRCAVH FAVDDHEVRF CTHLKGKGSW FLPFDKGYND GAGNPPNPAG LATDYLWKET
LSKEGLTDIL ENYAQVVEEK DEKTGKKRYK QIFPRYHQLK VVRMLLANAA ESGIGRRYLI
QHSAGSGKSN SIAWLAHQLV GLEHESKALF DSVIVVTDRR VLDKQIRDTI KQFAQVSATV
GHAEHSGDLR KFLKAGKKII ITTVQKFPFI LDEIGDEHRK SKFAIIIDEA HSSQGGKTTA
AMNRVLEETA PYGGSDDEEE ETVEDKINKI MEGRKMVTNA SYFAFTATPK NKTLEIFGEP
DPQPDGTVKH HPFHSYTMKQ AIQEGFILDV LKNYTPVESY YRLAKTVEDD PLFDANKAQK
KLRRYVESHE HAIREKAEIM VDHFHAQVIG HRKIGGHARA MVITNGIERA IQYFHAFRDY
LKERKSPYAP IVAFSGEHEY GGKKVTESTL NGFPSSQIPD KVQQDPYRFL IVADKFQTGY
DEPLLHTMYV DKALSGIKAV QTLSRLNRAH PQKHDTFVLD FYNDSETIQR SFEPYYRTTI
LSDETDPNKL HDLKSDLDGY QVYSQVQIDD LVGLYLNGAD RDKLDPILDA CVATYNADLD
EDGQVDFKGK AKAFVRTYGF LSSILAYSNA DWEKLSIFLN FLIPKLPAPK EEDLSRGILE
AIDMDSYRVE VKTSLKIGLP DQDAEIGPVP TTGSGRKPEP ELDQLSNIIK AFNDQFGNID
WKDGDKIRKV IAEEIPAKVA ADAAYQNAMK NNDKKTARIE HDAALQRVMI DLLSDHTELF
KQFSDNPSFK KWLGDTIFGV TYQQQAEQSA TGASHGR
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