| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1786 |
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| Symbol | |
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| ID | 3756786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1838108 |
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| End bp | 1839274 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637782667 |
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| Product | membrane-bound lytic murein transglycosylase C |
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| Protein accession | YP_388278 |
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| Protein GI | 78356829 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0048651 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TGGCATTGCC GCTGCTTTGC GCAACGCTGC TTTGCGCATG CTCCCCCGGC
GAGGCAGTAC GCATGGCCCG CGTGGCCACA TCAGGAGACA TGGCCGGCGC CGCGGCACTG
GCCCGTGACA AGGGTATCCG CTATGCCATG AATCCGGCAC AGCTGGAGGC TGACCTCAAA
CAGCTTGCCC GCCGCCTGCA GGAATTCAGA GACGCCGTGG CAGGCAAATG GGGCAAGGAT
GAAACCAGAG AGGCCGGTCC CAAAGAATAT GTCAAATACA CACAGAATTA TCTGTCGCGT
GCCAGCGTTG ATTTTGACAA AGGCGTTGTG ACTGTGGAGA CTGTTGACGA CAAATCACCA
GAAAAGAGCC TGCACAGTGC CATTGTAACC ACGCTGCTGA CCCCCGCCGA TCCGCGCGCT
GTGGATATGT ATTCCGCCGG TGAGGTTCGT CTGGGCGAGG AACCTTTTCT ATACAATGAG
GTGGTAGACT ACCACGGCAA GCCCATACGT TGGGCATGGC GTGCCGAGCG CTACGCCAGC
GATCTCATCC GGCGGGCAAG GACCATGCGG CAGGTCACAG TGGACGGAAA ACGGGTTACT
GTACACAGTG TCTCGTTTGC CATGGTCAAA GACCATCTGC ATATCCGGGC GCGCAAGTTT
CGTGAGCCTG TCCGGCGGTT TGCCCGTGAG TACGGAATAA GCCCCAATCT GGTATACGCC
GTCATGAAAA CGGAAAGTGA CTTCAACCCC TTTGCGGTCA GCCATGCTCC CGCTTACGGA
CTTATGCAGG TTGTGCCTTC CACCGCGGGA AGCGACGTGT ATACAATGCT TAACGGCAGG
AAGGGTTCCC CGACGCCGGA GCAGCTTTTT GATCCCGAGA TCAATATCCG CTACGGCACG
GCGTATCTTT TCATTCTCAA TAACAGGTAC CTTTCCGACA TCCGCCATCC GGTATCCCGC
GAATACTGCA TGATTGCCGC TTACAACGGC GGCGCAGGAG CCGTGTTGCG CAGCTTCCAC
GAAAACAGGC GGACTGCCGC AGAAATCATC AACTCACTTT CGCCCGATGA AGTGTATGAC
AGGCTGCAAA AGCGGCTTCC GTCCATGGAA ACCCGCAGAT ATCTGTGGAA AGTGGGGCAA
GCGCGCAAAG AGTTTGTTGC ACTCTGA
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| Protein sequence | MKKMALPLLC ATLLCACSPG EAVRMARVAT SGDMAGAAAL ARDKGIRYAM NPAQLEADLK
QLARRLQEFR DAVAGKWGKD ETREAGPKEY VKYTQNYLSR ASVDFDKGVV TVETVDDKSP
EKSLHSAIVT TLLTPADPRA VDMYSAGEVR LGEEPFLYNE VVDYHGKPIR WAWRAERYAS
DLIRRARTMR QVTVDGKRVT VHSVSFAMVK DHLHIRARKF REPVRRFARE YGISPNLVYA
VMKTESDFNP FAVSHAPAYG LMQVVPSTAG SDVYTMLNGR KGSPTPEQLF DPEINIRYGT
AYLFILNNRY LSDIRHPVSR EYCMIAAYNG GAGAVLRSFH ENRRTAAEII NSLSPDEVYD
RLQKRLPSME TRRYLWKVGQ ARKEFVAL
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