| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1703 |
|---|
| Symbol | |
|---|
| ID | 3756701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1761804 |
|---|
| End bp | 1762979 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637782583 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_388195 |
|---|
| Protein GI | 78356746 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCACACTT CATCCTCCCC CTCTTTTTCA AAAGCGTTTC CCTGGGTGCT GTTCGTCACA
CTGATTTTTT TCATCAACTA CCTGCCGCGC AGTCTTGTTT CGCCGCTGCT GGTACCCATG
GAAGCAGAGC TCAACATGAG CCATTCGCAG GCCACCGGCC TGCTCTTGCT GTTATCGGCA
GGCTTTTCCG TCAGCATGGC TCTTTCCAGC GTGCTCAGCA GGGTGCTCGC GCACCGCACT
GTGGCTGCCC TTTCAGCAGT GGCAGGAGGC CTGGCGCTGG GCACTTTCGC TTTTGTGGAA
ACACGTGTGC AGGCAGGAGC GGCCATACTC TGTTTCGGCC TTTCGGCGGG GCTTTACTTT
CCTTCCGGCA TGGCCACGCT GGCCGGTCTG GTGCGGCACA AAGACTGGGG CAAAGCCATC
GCGGTGCATG AACTTGCCCC CAATGTCAGC TTCATTGCCG CTCCGCTAAT CGCCTCGCTG
GCGCTTGTCT TCATGTCATG GCGCGAAGTT CTGTGCTTGA CAGGTGCGGT GTCTTTCGTG
CTGGGTCTTA TGTTTCTGTT TTTCGGCAGG GGCGGCGAAA AACAGCGCGA AGGCAATCTG
CCTGTCTCCT GCCGCAGCCT GCTTGTCCGC CCCAGACTGT GGCTTTTTGT TGTGCTTATC
GGGTTAAGCA TAGGCGGCGA GTACGCCCCC TTCAGCGTTC TGCCGCTTTA TCTTGTCAAT
GAAAAAGGCA TCCCCTTTGA CACCACCAAC TCCGTTTTAA GCGCTTCGCG CCTGGCCTGT
CCCTTTGTGG TACTGGCCGC CGGAATTGTA GCTGACCGGC TGGGCACAAA AACGGCCGTC
AGGCTGTACC TCATATTTCA CGGCGTCATG CTGTTCGGGG TCGGGCTGGC CTCCGGCATG
CTGCTGACGG GCAGCATTAT CATGCAGGCC TTACTCACAG CGTTTGTCTT TCCCGCTGTA
TTCAAGCTGC TTGCAGAAGC GTTCACACCG GCAGAACAGG CAACGGCCAT GAGCCTGATC
ATGCCCATGG CCGCAGTGCT GGGCACAGGC ATCATTCCGG CCATACTGGG AATGTGCGGA
GACGCCGGCA GCTTCGGAGC CGGTTTCATT GCCATGGGAC TCATGAACTT TGCCGCGCTG
GGAGCGCTTG TAAAAACAGC CGGCAGCAGG GGGTAA
|
|---|
| Protein sequence | MHTSSSPSFS KAFPWVLFVT LIFFINYLPR SLVSPLLVPM EAELNMSHSQ ATGLLLLLSA
GFSVSMALSS VLSRVLAHRT VAALSAVAGG LALGTFAFVE TRVQAGAAIL CFGLSAGLYF
PSGMATLAGL VRHKDWGKAI AVHELAPNVS FIAAPLIASL ALVFMSWREV LCLTGAVSFV
LGLMFLFFGR GGEKQREGNL PVSCRSLLVR PRLWLFVVLI GLSIGGEYAP FSVLPLYLVN
EKGIPFDTTN SVLSASRLAC PFVVLAAGIV ADRLGTKTAV RLYLIFHGVM LFGVGLASGM
LLTGSIIMQA LLTAFVFPAV FKLLAEAFTP AEQATAMSLI MPMAAVLGTG IIPAILGMCG
DAGSFGAGFI AMGLMNFAAL GALVKTAGSR G
|
|---|
| |