| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1635 |
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| Symbol | |
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| ID | 3756632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1686704 |
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| End bp | 1688434 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637782514 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_388127 |
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| Protein GI | 78356678 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.980236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGTCGGT TTCATCCGGC ACGGCTGTGT GCGACTATGT TTTTTGCGGT GACTTGCCGT
GAACAGCACA ATGTGTTTGA CCTGAACCAT GCTGGTAGTC GACCTAGGTC TCAGCGCCGT
GGCCGGACGC CGCAATCAGC ACTTATTATG AACCAGATCA ATACCCAAGA TTCCAGATTA
CAGCCATATC TAGGCACGCT GCAGCGCATT GTTTCCGACA TGGGCCCGCA GCGTCCGTTT
CAGTCTTCGC TGAAGTCATT ACTGCGCACG CTGGCTGAAA ATCACCATTT CAAACGCCCC
CACCTTGTTA TATTCGATCC CGAAACACAA ACGCTCAAGC TTAGCCTGAC GCATGATCCT
ACCAAAGCGC AGGATGTGGA ATATTCGCCG GGAGTGGGGG TGACCGGACA GGTTTTCAGT
TCCGGACAGC CTGTTATCGT GCCGAGGATG AAAGATCATC CTTCGTTTCT CAATAAAGCG
TTCGGCCGTT CGGAAGAAGA GCTGGCAACT CTGGGCTTTA TATGCGTGCC TGTGCTCGGA
CCGGGCGAAG AAGCCTCTCC CCGGGAGGTT ATCGGCACAC TGAGCGTGGA CACGCCCATA
ACTGACCTGC CCTCTCTGGA AGGACAGTGC CGTTTTCTGC AGGTTGTTGC CGGTATGATA
GCCAACCAGG CTGCCTACCT GCAGGAAGAA ATGGCCCGTC AGAAGCATAT GATGACGCAG
GGCCTCATAG GCGGTGACGT TGCCGAAAAC ACGGTGCAGG CCGCTAATAT TGTGGCTGCG
TCCAAGTCCA TGCGCCTTGT GCTCAATCAG GTGGCTCAGG TTGGTCCCAG CAGGGCGACG
GCTTTGCTGC GGGGCGAATC GGGCACCGGC AAAGAGCTTC TTGCAGAGGC CATACATCAG
GCCAGCCCCC GGCGTGATAT GCCGCTTATC AAGCTTAACT GCGCGGCTTT ACCATCCGAT
CTGGTGGAAA GCGAGCTGTT CGGCTATCAG AAGGGCGCGT TTACAGGTGC TGTCCAGAAT
AAAAAAGGCC TTTTTGAGCT TGCACACAAG GGGACGCTGT TTCTTGATGA AATAGGTGAA
TTGAGTGCCT CGGCTCAGGC TAAAGTGCTG CGTGCCATTC AGGAACAGGA AATTCAGCGG
CTCGGCAGTG AACAGACCAT TTCCGTTGAT GTCCGCCTGA TCTGCGCCAC ACACCAGCAT
CTGGAAGAGC TTGTGGAGAG CGGCAGTTTC CGTGAGGATC TTTATTACCG GATCAATGTG
TTTCCGGTGT TCATTCCTCC GCTGCGCGAA CGCCGCGAAG ATATTCTTCC CGTTGCTGAG
CATTTTCTTA AAGAATACGC AGAGGAATAT CAGAAAAGCA TCAAGCGTAT TTCCACCCCT
GCCATCGACC TGCTTACACA GTATCACTGG CCCGGTAACA TCCGCGAACT GAAAAACTGC
ATAGAGCGTG CAGTGCTGGT GTGTGATGAA CAGGTTATCC GTACGTATCA CATGCCCCCT
TCGCTGCAGA CAGCAGAAAG CACAGCAACA GATTCCAGTC TGTCGTTCTG CGAGGCGGTG
GCCAAGTTTG AGCAGGAACT ACTGGTTGAC GCGCTGAAAA AAGCCCGTGG CAATATGTTG
CAGGCTGCCC GCGATTTGCG CGTAAGCTAC CGTATTGTTA ACTATAAAGT TAAGAAGTAC
GGTATCGATG CCAAAAAGTT CGCTGTCAGT AAAGGACGCA TGGGCAGATA G
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| Protein sequence | MCRFHPARLC ATMFFAVTCR EQHNVFDLNH AGSRPRSQRR GRTPQSALIM NQINTQDSRL
QPYLGTLQRI VSDMGPQRPF QSSLKSLLRT LAENHHFKRP HLVIFDPETQ TLKLSLTHDP
TKAQDVEYSP GVGVTGQVFS SGQPVIVPRM KDHPSFLNKA FGRSEEELAT LGFICVPVLG
PGEEASPREV IGTLSVDTPI TDLPSLEGQC RFLQVVAGMI ANQAAYLQEE MARQKHMMTQ
GLIGGDVAEN TVQAANIVAA SKSMRLVLNQ VAQVGPSRAT ALLRGESGTG KELLAEAIHQ
ASPRRDMPLI KLNCAALPSD LVESELFGYQ KGAFTGAVQN KKGLFELAHK GTLFLDEIGE
LSASAQAKVL RAIQEQEIQR LGSEQTISVD VRLICATHQH LEELVESGSF REDLYYRINV
FPVFIPPLRE RREDILPVAE HFLKEYAEEY QKSIKRISTP AIDLLTQYHW PGNIRELKNC
IERAVLVCDE QVIRTYHMPP SLQTAESTAT DSSLSFCEAV AKFEQELLVD ALKKARGNML
QAARDLRVSY RIVNYKVKKY GIDAKKFAVS KGRMGR
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