| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1548 |
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| Symbol | |
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| ID | 3755987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1566944 |
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| End bp | 1567981 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637782425 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_388040 |
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| Protein GI | 78356591 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0248122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAT CGGGACATTT TTTCAGAGGC ATGAAGCGTT TTATGGCCGC CGCACTGGTC
GTGCTGGCTG TTCCGGCGCT GGCTGCGGCC GCCATGACGG TCAAGATGAG TTACAACGGG
CCGCCCAGTC TGGAAGACAA CGCCGTGCAT GCTTTTGCCA CCACTTTCAA GGAACTGGTT
GAAAAAGAGT CCGGAGGCGG CATTGTCATC GACCTGTATC CCAACAGTCA GCTGGGTAAT
GAGCAGCAGC GCATGGAACA GGTGATGACC GGTCCCATGA TCAATGTGGC TTCTTTCGGC
GGTATGGAGA CCGTGTTTCC TGAAATGTTC GCCACCAACG TACCCTTCAT GTTTGAAAGC
TACGCTGCGG CACATGAATT TTTCGACAAC AGCTCTTTTA TGGATAAAGC CGGAAAAGAG
CTGCGTTCGC GCACCGGCAT CGAGCTGCTG GCCGTGGTGG AAGAGGGGGG CTTCATTGCC
TTTACTTCCA AAAAGCCCGT CAGGTCTCCG GCTGATTTCA AGGGTATGAA ATTCCGCGCC
ATGGATGCCA GCCAGGTAGC CATGTACGAA GCCTTCGGAG CTTCCGGAAC TCCTATTCCG
TGGACCGAGG TGTATCTTGC GCTTAAAACC GGCGTGGCAG ACGGCCAGAT GAACCCCCCT
ACCTATATCA TCATCGGCAG CCTGTACGAG GTGCAGGACC ATCTCACCCT TGCCAACGTC
CAGTATTCCG ATCAGTTCCT GTTGATCAAC GGTGAACTGC TTGACTCTCT TCCCGACAGC
CAGCGTCAGG TAATCCGTAA GGCGGCGCAC GAGGCAAACG TCAAGACCCG CCAGTTTGTG
GAGTCTCAGG TGGACGAGCG TGTGAAGTTT CTGGCCAGCA AGGGCATGAC CGTTTACACC
CCCACCGCGG AAGAGCTGGC GCAGTTCAAG GAACTTGGCA GTCCTTCCTA CATCAAGTGG
CTCAGCGGAC AGATTGACAC GGCATGGATA GACCATGCCA TGGAAGACGC CCGCAAGGCC
AATGAGGCAG TGAAATAG
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| Protein sequence | MKPSGHFFRG MKRFMAAALV VLAVPALAAA AMTVKMSYNG PPSLEDNAVH AFATTFKELV
EKESGGGIVI DLYPNSQLGN EQQRMEQVMT GPMINVASFG GMETVFPEMF ATNVPFMFES
YAAAHEFFDN SSFMDKAGKE LRSRTGIELL AVVEEGGFIA FTSKKPVRSP ADFKGMKFRA
MDASQVAMYE AFGASGTPIP WTEVYLALKT GVADGQMNPP TYIIIGSLYE VQDHLTLANV
QYSDQFLLIN GELLDSLPDS QRQVIRKAAH EANVKTRQFV ESQVDERVKF LASKGMTVYT
PTAEELAQFK ELGSPSYIKW LSGQIDTAWI DHAMEDARKA NEAVK
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