| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1546 |
|---|
| Symbol | |
|---|
| ID | 3755985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1564706 |
|---|
| End bp | 1565488 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637782423 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_388038 |
|---|
| Protein GI | 78356589 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00070993 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAG AACCGGCCGT TACTGACAGA CGCCCTGACC CGCTTTTTGT ACATTCACTT
CAACGGGCTC TGATGGTTCT GGAGGCCTTC GATTCCACTG CCCGCAATCT GAGTCTGTCG
GACCTGAGCC GCAAGACAGG GCTGAACAAA AGCGCTGTTC AGCGCTTTCT CTTTACATGG
GAGGCCCTTG GCTATCTGGA AAAAGACACA GATACCAAGC GTTATTCTTT AAGTCCAAAG
GTAATGTCGC TCAGCTATCA TTATTTGAAG GACAAACGAC TTGTGGAAAT TGCCACACCG
GTGCTGCTGG AAATGCGTAA AAGAACAGGA TGCGCCAGTT ATCTGGGTAT TCTGTACGAG
CAAGACGTTA TGTATCTTAT ACGCCTGCCC CAGCGGTTCA TATTGCTTGA AAGCACGCTG
GCGGGCAGAA GGGTGCCCGC ATTCTGCGGC GGCAGGGCTC TGCTTTCGTG TCTGCCGCAA
AACAGCGCCC GCAGCCTGAT AGAACAGAGC ATCAGAACGC AGCTGACGCC GTTCACCATC
ACTGACAGCG AGGCAAACAT GCGGGCCGTA CGGCAGGCGG CAGAACTGGG GTATGCGGTT
TCGCGTCAGG AGCAGCTCAT AGGTGAAGTT TCCGTTTCAG CACCCGTACT ATCGTCCGGC
GGTACACTGC TGGCCGCTGT CTATATTTCT GCAGACAACA ACGAATGGGA CGACAGCCGC
ATTGCCGCCG AGCTGGCACC GGTGGTACTC AAAGCCGCAT CAGACATCGG CCGCCAGTTC
TGA
|
|---|
| Protein sequence | MAEEPAVTDR RPDPLFVHSL QRALMVLEAF DSTARNLSLS DLSRKTGLNK SAVQRFLFTW
EALGYLEKDT DTKRYSLSPK VMSLSYHYLK DKRLVEIATP VLLEMRKRTG CASYLGILYE
QDVMYLIRLP QRFILLESTL AGRRVPAFCG GRALLSCLPQ NSARSLIEQS IRTQLTPFTI
TDSEANMRAV RQAAELGYAV SRQEQLIGEV SVSAPVLSSG GTLLAAVYIS ADNNEWDDSR
IAAELAPVVL KAASDIGRQF
|
|---|
| |