Gene Dde_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1386 
Symbol 
ID3756173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp1404363 
End bp1405376 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content58% 
IMG OID637782264 
Productamino acid ABC transporter permease 
Protein accessionYP_387880 
Protein GI78356431 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0693888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCAT ATAGAGGGCT GGATGCGCCC AGAGGTCCGG GATACTTTCT CTTCTGGAAG 
GCGGCTTTTG TGGCGATGCT GCTTGTCACT GTCGGTTTTC TGTGGGCTGC GTCCAATTCT 
GTGGAGTATG TATGGCGGTG GAACCGCATT CCCCAGTATT TCTGGGTGCA GAAACATGTG 
GACGTGCGCG CTGAGCAGCA GGGAACTCTT GTTGAGACGC TGACAAAAGA CGGCGCACGG 
TTTGTGGTGC TGCAGGAAGA CGACGGTACC CGTGTGCAGC AGAAGCTGGA ACCGGGTATG 
TCTCTTACTC CGGCGCAGGG GGATTACGTT TATCTGGGCG ATGTGCTGGG CACATACAGG 
GTCAGCGAGC CGGGAGTGCT GCTGCAGGGG CTGTGGGTCA CGCTGGAGGT CAGCCTCATT 
TCCATTGTGT TCGGCATCAC CTTCGGTGTG CTGACCGGCC TTGCCCGCAT TTCCGAAAAC 
CCCGCGCTTA AATGGGGGGC CATCACCTAC ATCGAGCTGA TCCGCGGTTC CCCCCTGCTG 
GTGCAGATTT TTCTGTGGTA TTTTGTCGCC GGTACGCTGG TGAACAATCT GCTTATGCAG 
GCCGGTCTGG GGCAGGTGCC GCCCATGTGG TTCGGTGTGC TGGCGCTGTC CGTGTTTACT 
GGTGCCTATG TGGCCGAAAT TGTCCGTGCC GGTATACAGT CTGTGCACCG CGGGCAGATG 
GAAGCAGCCC GGTCGCTGGG TCTCAATTAC AGTCAGGCCA TGCGCAAGGT CATTCTGCCG 
CAGGCCTTCC GCCGCATCAT GCCGCCGCTG GCAGGGCAGT TCATCAGTCT GGTCAAAGAC 
TCTTCTCTGC TGGGCGTCAT CGCCATCCGC GAACTGACCA AGGCAACACG TGAAGTTGTC 
AGCTCTTCGC TGCAGCCTTT CGAGCTGTGG ATTCTGTGCG CGGTGCTGTA CCTGCTGCTT 
ACCTTCACGC TTTCGCTGTT TGTCTCTTAT CTGGAAAACA AGGCCGTACG ATGA
 
Protein sequence
MTAYRGLDAP RGPGYFLFWK AAFVAMLLVT VGFLWAASNS VEYVWRWNRI PQYFWVQKHV 
DVRAEQQGTL VETLTKDGAR FVVLQEDDGT RVQQKLEPGM SLTPAQGDYV YLGDVLGTYR 
VSEPGVLLQG LWVTLEVSLI SIVFGITFGV LTGLARISEN PALKWGAITY IELIRGSPLL 
VQIFLWYFVA GTLVNNLLMQ AGLGQVPPMW FGVLALSVFT GAYVAEIVRA GIQSVHRGQM 
EAARSLGLNY SQAMRKVILP QAFRRIMPPL AGQFISLVKD SSLLGVIAIR ELTKATREVV 
SSSLQPFELW ILCAVLYLLL TFTLSLFVSY LENKAVR