| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1335 |
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| Symbol | |
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| ID | 3756194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1352913 |
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| End bp | 1354148 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637782213 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_387831 |
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| Protein GI | 78356382 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0113207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGAA CCACAGGCAT GCTCAGCGGT CTGCGCATCG CGCGCCAGTC GCTCTCCACC
CACCGTATGC GTACAGTTCT GGCCATGCTG GGAGTTTTTC TGGGTGCCAT GGTGCTTACC
GGCGTGCTTC ATATTTCCAA ATCGCTGGTG CGCAAGGCTG AAATAGAAAC AGAAAAACTG
GGGCCCAACC TGTTTCAGGC AGCATCCGGC ACCATCAGCT TCCGCAGAAG CGGTTCTGCA
CGCTTCAGAG GAGAAACCAC CACGTTTTCC CTGCGCGACG CCGAAGCACT GTTACGTTCT
GTACCGCAGA TAGAAAAAGG CGTGCCCTAT GTCACCCGCA CCATGCCCAT CCGCAAAGGA
CGTATGGCCA CGCAGTGTCA GCTGGTGGCC ACCCTGCCGC TGTACACCGA CGTGCGCAAT
ATCGAAATTG ATGCGGGCCG GTTCTTCACC TCTCGCGAGG TGGAAGAAAT GGCTAAAGTC
ATCGTGCTGG GCCGTACCAT TGCGGAACGG CTGTTCGGTT CCCCTGCACA GGCTCTGGGC
CAGACGGTTT TCTTTTACCG CGCCAACCTT ACCGTAGTCG GCATAATGGC CGAAAAAGGC
AGTGATCTTT CCGGTACCGA TCAGGACGAA CAGGTATTTG TGCCGCTGAC AACCTACATG
CGGCGCATGT CAAACCAGAC ATGGGTTTCG GGCGTGTTCA TGAACCTGAA ACGCGGCGCT
TCGGAAGACG CCGCACGCAG AGCCGCCACG GAGATACTGC GGCAGCGCCA CGGCACTTCC
GGAAATGATG ACGACTTTTC CATCCTTACC GCACGCGAAG CCACGCAATT GCAGAAAAAG
GCTCTGGATC TCGTATGGAC GCTGGGACTG CTTTCCTCCG GCATTTCTTT TTCCGTCGGC
AGTCTGGGCA TTCTGTCCAT AATGATTCTG CTGGTCCGCG CCCGCCGGCT GGAGATAGGC
ATACGCCGCT CTGTGGGAGC CACGCGGGGC AACATCATGG GACAGTTTCT TATGGAATCA
GCCATCATGG CCGGTGCTGG CGGCGCCGCA GGCGTGATCA CGTCAGCCGG ACTGATTACA
ATTGTCTACT ATTTTGCCGG CCTGCCGTTT GTATACGACC CGCTGCTCAT CGGCGGCATA
TGCGCAGGCT CCGTTCTGCT GGGACTGGCC GCAGGGGCCT ATCCGGCCTG GCAGGCATCG
CGCCTTGAAA TTCTGGCCGT ACTGCGCAGC GCATGA
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| Protein sequence | MSRTTGMLSG LRIARQSLST HRMRTVLAML GVFLGAMVLT GVLHISKSLV RKAEIETEKL
GPNLFQAASG TISFRRSGSA RFRGETTTFS LRDAEALLRS VPQIEKGVPY VTRTMPIRKG
RMATQCQLVA TLPLYTDVRN IEIDAGRFFT SREVEEMAKV IVLGRTIAER LFGSPAQALG
QTVFFYRANL TVVGIMAEKG SDLSGTDQDE QVFVPLTTYM RRMSNQTWVS GVFMNLKRGA
SEDAARRAAT EILRQRHGTS GNDDDFSILT AREATQLQKK ALDLVWTLGL LSSGISFSVG
SLGILSIMIL LVRARRLEIG IRRSVGATRG NIMGQFLMES AIMAGAGGAA GVITSAGLIT
IVYYFAGLPF VYDPLLIGGI CAGSVLLGLA AGAYPAWQAS RLEILAVLRS A
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