Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1197 |
Symbol | |
ID | 3755262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1224823 |
End bp | 1225878 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637782067 |
Product | putative signal transduction protein |
Protein accession | YP_387693 |
Protein GI | 78356244 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.408421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAA ACGCATCAAA CGACCACATG GCCCTTAGCG AGGACTATGT TAGAAATTTC TTCACATATG CCGATCCGGA CAACGAAGCC ATGCTTCAGC TGTACCGCAT CGGAGTTTTC CGCACGGCAA AAGCGCTCTC TGCAGGGTGG ATAATGCCCG ACGAGGACGC CCGCACCGCG CGCAATCTGG AATACCTGCG TGACAACTTC GAACCGGGCG ACGTGTCCGT GGGAGAGCTT GTCTCCAGCG AAACGCAGCT TGCCTCGTTT CCGGACATCT ACTTCCGCAT CCGCAAAGTG CTCGATTCGC CCAACAGCTC GGCTGACGAC ATCAGCCGCG AAATCAGCAA CGATCTTGGC CTGACAGCCA AGCTGCTCAA GCTGGTGAAC AGCCCGTTTT ACGGTCTTGC ACACACCGTC GAGGATGTAA GCCACGCCAT AGCCATAGTG GGAGTGGAAG AAGTTTCCAC GCTGGCGCTG GGTATATCCG CCATCAATGT GTTCAAGGAT ATCCCGCAGG AACTCATCGA CATGAAAGCC TTCTGGAAGC ATTCTGTAAG CTGCGGCGTG TTTGCCAAGC TCATCGCTTC GCGCATAGAA GGCATGAAGG CCGACAAATT TTTCACCGCC GGTCTGCTGC ATGATGTGGG CAGGCTGATA ATCTTTAAAA AAATGCCTTA CGCCTCGGTT CAGCTGCTGC TGTACGCCCG CGAAAATCAG CTGCCGGTGG TGGAAAGCGA AGAAGATCAT CTGGGCTTTG ACCACACGCA GGTGGCCAAA CAGCTGCTTA CCGAATGGAA GTTTCCGGCA TCCATGGTGG ACTGTCTGGC TTTTCACCAT GCCCCTTCGC AGGCGCAGGA CCAGCTTGCG GCTTCAATTC TGCAGCTGGC TGACAATATG GCCAACGCCA TGGAAATATC TTCCGGGGGC ATGTACCTGC TGCCCGGCAT GGAAGAAGGA GCATGGGAAC GCATTCCCCT GCAGGGTGAT GACCTTGTGG AAATCGTCGG ACTCTTCGAC TCGCACATCG AGGAACTCTT CAAAGCCATT CTGTAA
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Protein sequence | MSQNASNDHM ALSEDYVRNF FTYADPDNEA MLQLYRIGVF RTAKALSAGW IMPDEDARTA RNLEYLRDNF EPGDVSVGEL VSSETQLASF PDIYFRIRKV LDSPNSSADD ISREISNDLG LTAKLLKLVN SPFYGLAHTV EDVSHAIAIV GVEEVSTLAL GISAINVFKD IPQELIDMKA FWKHSVSCGV FAKLIASRIE GMKADKFFTA GLLHDVGRLI IFKKMPYASV QLLLYARENQ LPVVESEEDH LGFDHTQVAK QLLTEWKFPA SMVDCLAFHH APSQAQDQLA ASILQLADNM ANAMEISSGG MYLLPGMEEG AWERIPLQGD DLVEIVGLFD SHIEELFKAI L
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