Gene Dde_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1197 
Symbol 
ID3755262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1224823 
End bp1225878 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content55% 
IMG OID637782067 
Productputative signal transduction protein 
Protein accessionYP_387693 
Protein GI78356244 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.408421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAA ACGCATCAAA CGACCACATG GCCCTTAGCG AGGACTATGT TAGAAATTTC 
TTCACATATG CCGATCCGGA CAACGAAGCC ATGCTTCAGC TGTACCGCAT CGGAGTTTTC
CGCACGGCAA AAGCGCTCTC TGCAGGGTGG ATAATGCCCG ACGAGGACGC CCGCACCGCG
CGCAATCTGG AATACCTGCG TGACAACTTC GAACCGGGCG ACGTGTCCGT GGGAGAGCTT
GTCTCCAGCG AAACGCAGCT TGCCTCGTTT CCGGACATCT ACTTCCGCAT CCGCAAAGTG
CTCGATTCGC CCAACAGCTC GGCTGACGAC ATCAGCCGCG AAATCAGCAA CGATCTTGGC
CTGACAGCCA AGCTGCTCAA GCTGGTGAAC AGCCCGTTTT ACGGTCTTGC ACACACCGTC
GAGGATGTAA GCCACGCCAT AGCCATAGTG GGAGTGGAAG AAGTTTCCAC GCTGGCGCTG
GGTATATCCG CCATCAATGT GTTCAAGGAT ATCCCGCAGG AACTCATCGA CATGAAAGCC
TTCTGGAAGC ATTCTGTAAG CTGCGGCGTG TTTGCCAAGC TCATCGCTTC GCGCATAGAA
GGCATGAAGG CCGACAAATT TTTCACCGCC GGTCTGCTGC ATGATGTGGG CAGGCTGATA
ATCTTTAAAA AAATGCCTTA CGCCTCGGTT CAGCTGCTGC TGTACGCCCG CGAAAATCAG
CTGCCGGTGG TGGAAAGCGA AGAAGATCAT CTGGGCTTTG ACCACACGCA GGTGGCCAAA
CAGCTGCTTA CCGAATGGAA GTTTCCGGCA TCCATGGTGG ACTGTCTGGC TTTTCACCAT
GCCCCTTCGC AGGCGCAGGA CCAGCTTGCG GCTTCAATTC TGCAGCTGGC TGACAATATG
GCCAACGCCA TGGAAATATC TTCCGGGGGC ATGTACCTGC TGCCCGGCAT GGAAGAAGGA
GCATGGGAAC GCATTCCCCT GCAGGGTGAT GACCTTGTGG AAATCGTCGG ACTCTTCGAC
TCGCACATCG AGGAACTCTT CAAAGCCATT CTGTAA
 
Protein sequence
MSQNASNDHM ALSEDYVRNF FTYADPDNEA MLQLYRIGVF RTAKALSAGW IMPDEDARTA 
RNLEYLRDNF EPGDVSVGEL VSSETQLASF PDIYFRIRKV LDSPNSSADD ISREISNDLG
LTAKLLKLVN SPFYGLAHTV EDVSHAIAIV GVEEVSTLAL GISAINVFKD IPQELIDMKA
FWKHSVSCGV FAKLIASRIE GMKADKFFTA GLLHDVGRLI IFKKMPYASV QLLLYARENQ
LPVVESEEDH LGFDHTQVAK QLLTEWKFPA SMVDCLAFHH APSQAQDQLA ASILQLADNM
ANAMEISSGG MYLLPGMEEG AWERIPLQGD DLVEIVGLFD SHIEELFKAI L