| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1194 |
|---|
| Symbol | |
|---|
| ID | 3755218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1222339 |
|---|
| End bp | 1223184 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637782064 |
|---|
| Product | amino acid ABC transporter periplasmic protein |
|---|
| Protein accession | YP_387690 |
|---|
| Protein GI | 78356241 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0931716 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCC TTTTTTTACC CCTCATGACT GCTTCATGTC CCTGCCTCCG GTTTCATGCC
GTCCGTCTGC CGGTACTGCT CTGCATCATG CTGTTTTTTA TTGCCTGCGC GCCCCTGAAC
GGCGCAGCCG AAGAAAAACC GCTTCCGCGG TCAATTGTGG CCGGAGCAAT CATAACTCCC
CCATGGATCA TGGGCACGGA AGAAGCCCGC ACGACCGGGT ACTGTACCGC CGTGTTCACG
GAGGCGTTCA GGCGCGTACA GACAAGGCTC ATCACCCTGC CCATGACAAA ACCGCGCCTG
CAGAGCTCGC TTGCAAAGGG AAAAATCCAT GCAGTGCTGT GTTCTTCGCG TTCATGGCAC
CCCAATCTGA CATTGCCCAT GGCAGAAAGC CTGCCCGTCG GACAATCGGG CAATATAATC
CTGATGCGCA GAAGCAGCGC CGTTCCTGTC CGTTCGCCGC AGGATCTGGC TGGCAGAACC
ATGGCCGCAC GGCTGGGGTA CTTTTTTCCC GCAGAGTACG AAGAAGCCTT TAAGCGGCGC
ACCATACGCA GGGTGGATGT GACAAGCGGA CTGAGCGGGC TGCATATGCT GCTGGCGGGA
AGAGTGGATG CTGTCATCAT GGAAGAAAAC GAAGCTGAAT GGCTGCTGTG GCAGGAAAAG
CAGGAACATG CCGTGGTCAT CGTCTACCGT TTTTCTGCGC TTACCCCGCT TGCTCTGCTG
CTTTCAGGAC CGGAGCAGCG GCTCATGCCG GCTGTCAACA ACGCGTTGCG CCACATGCAG
CAGGACGGCA CCATACAGGC TCTGCGCACC CGCTATCTGC AGAAGCATCT GGAATCCATT
GACTGA
|
|---|
| Protein sequence | MRTLFLPLMT ASCPCLRFHA VRLPVLLCIM LFFIACAPLN GAAEEKPLPR SIVAGAIITP
PWIMGTEEAR TTGYCTAVFT EAFRRVQTRL ITLPMTKPRL QSSLAKGKIH AVLCSSRSWH
PNLTLPMAES LPVGQSGNII LMRRSSAVPV RSPQDLAGRT MAARLGYFFP AEYEEAFKRR
TIRRVDVTSG LSGLHMLLAG RVDAVIMEEN EAEWLLWQEK QEHAVVIVYR FSALTPLALL
LSGPEQRLMP AVNNALRHMQ QDGTIQALRT RYLQKHLESI D
|
|---|
| |