| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1131 |
|---|
| Symbol | |
|---|
| ID | 3755155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1160194 |
|---|
| End bp | 1161354 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637782001 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_387627 |
|---|
| Protein GI | 78356178 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.28736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGAGT CCTTTCTGGT TTTCGGACAG CCCCTTATCG AACAGGACGA AATAGACGAA
GTCGTGGACT CCATGCACAA GGCATGGATC GGCACCGGTC CCAAGGTGCA TCAGTTTGAA
CGCGATTTCG CCGCATACAA GGGCGTGGCG CATGCCGCCG CCGTCAACTC GTGCACGGCA
GCCCTGCACC TTGCCTGTCT TACACTCGAC CTTGCACCCG GCGACGAGGT GATAACCACC
GCCATGACCT TCTGCGCGTC GGTCAATGCC ATCATCCATG CCGGCGGTAC TCCCGTGCTG
GCTGATGCAG ACCCCGTCAC GCTTAATATT TCGGCCGAAA CCATAGCCCC GCACATCGGC
CCGCGCACCC GCGCCATCAT GGTGGTGCAC TACGCAGGAC GCTGCTGCGA TATGGACCCC
ATAATGGAGC TGGCCCGCAA ACACGGTCTG ATTGTCATCG AAGACTGCGC CCACGCCATT
GAAAGCGAAT ACAAAGGGCG CAAAGCCGGC ACCATAGGGC ACATAGGCTG CTTCAGCTTT
TACGCCACCA AAAACATCGT CACCGGCGAA GGCGGCATGA TCATTTCTGA CGACAAAGCC
GCCATAGACC GCTGCAAAAT AATGGCACTG CACGGCATGA GCGCCGACGC ATGGGCCAGA
TTCAGCGATG CGGGCTACAA GCACTATCAG GTTGTTGATC ACGGCTTTAA GTACAACATG
ATGGATATTC AGGCGGCCAT GGGCATCCAT CAGCTGCGGC GCGTGGAAGA ATACTGGAAA
CGCCGCGCCT GCATATGGCA GAAGTACAAT GAAGGACTGG CCGGACTTGG CATGGGCCTG
CCCGCCGACG CCGAGGAACA TACCCGCCAT GCGTACCACC TGTACACCAT ACGGGTGTCG
GCCGCGTGCT GCGGCGTGGA ACGCGACGCC ATGCTTGAAG CGCTGAGGGC GCACAACATA
GGCGTGGGCG TACACTATCT GGCAGTTCCC GAACACCCCT ACTACCGGCG CCGTTTCGGC
TGGGACCCGG CAGACACTCC GGTGGCCACA GCTTACGGGC GCGAGACTGT CAGCCTGCCC
CTTTCCCCCA AACTGTCAGA CGGTGATGTG GACGATGTCA TAGAAGCCAT CCGCGCCATC
TGCACGGAAT CTGCCAGATG A
|
|---|
| Protein sequence | MRESFLVFGQ PLIEQDEIDE VVDSMHKAWI GTGPKVHQFE RDFAAYKGVA HAAAVNSCTA
ALHLACLTLD LAPGDEVITT AMTFCASVNA IIHAGGTPVL ADADPVTLNI SAETIAPHIG
PRTRAIMVVH YAGRCCDMDP IMELARKHGL IVIEDCAHAI ESEYKGRKAG TIGHIGCFSF
YATKNIVTGE GGMIISDDKA AIDRCKIMAL HGMSADAWAR FSDAGYKHYQ VVDHGFKYNM
MDIQAAMGIH QLRRVEEYWK RRACIWQKYN EGLAGLGMGL PADAEEHTRH AYHLYTIRVS
AACCGVERDA MLEALRAHNI GVGVHYLAVP EHPYYRRRFG WDPADTPVAT AYGRETVSLP
LSPKLSDGDV DDVIEAIRAI CTESAR
|
|---|
| |