| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1091 |
|---|
| Symbol | |
|---|
| ID | 3755440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1121594 |
|---|
| End bp | 1122373 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637781961 |
|---|
| Product | PTS system, IID component, putative |
|---|
| Protein accession | YP_387587 |
|---|
| Protein GI | 78356138 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGG ACGCACGAAC CCTGCTACGC TGTTTTCTGC GCACCTACAC AGTGGGGGCC
GCATTCAACA CGCGCGGCAT GCAGAATATC GGGTTGGTGC ATGCCATGGA ACCCGGCCTT
GCGGCCATAT ACCCCGATCC GGTAAAACGG CGCGAGGCCC GCAAAAAATA TATCCGGCAC
TACAATACCC ATCCTTTCTG GACACCGCTG CTGGTGGGTA CGTTTCTTTC ACTGGAAGCG
GGCATAGCCG CGCAGACCTT CCCGCCGCAG ATTCTGCGCA ACCTGAAGGA TACCACGGCC
TATACCCTGT CAGCCATCGG CGACTCCGTT TTCGGCGGCA CCATGCTGGT ATCGTGGTCG
CTGGCCACAT GCAGTCTGCT GGTGGCGGGT TACCAGTCGG CGGCGTTTGC TCTGGGGCTT
TTTCTGTTCA CGGCGCTGCA GGCGTTCAAG CTGTTCACCT TCATCGCCGG ACTGCGCGAA
GGGCTTAAAG TGCTCAACCG GCTGCGCAAC TGGAACCTGA TAAACTGGGG TGAAAGGCTG
AAGTCGGGTA ATGCTGTGCT GGCGGCGGTG CTGCTGTGGC AGCTGTTTCC CGCGCATGAC
CGCCCCGCCC TGTGGGCTGC GGCATGCGCC GCGCTGGGAC TGTTCGCCGC GCTGGTGGGC
CGTCTGCACA TGTCGCGCAT GCTGCTGCTG TTTATTTTTA CGGCTGTTAT ACTGGCACTG
CCGTTCGCCA CGGCGTATGT TCCCGTGGAG TGGCATCTTT TCTGGCAGCC CGCTGACTGA
|
|---|
| Protein sequence | MALDARTLLR CFLRTYTVGA AFNTRGMQNI GLVHAMEPGL AAIYPDPVKR REARKKYIRH
YNTHPFWTPL LVGTFLSLEA GIAAQTFPPQ ILRNLKDTTA YTLSAIGDSV FGGTMLVSWS
LATCSLLVAG YQSAAFALGL FLFTALQAFK LFTFIAGLRE GLKVLNRLRN WNLINWGERL
KSGNAVLAAV LLWQLFPAHD RPALWAAACA ALGLFAALVG RLHMSRMLLL FIFTAVILAL
PFATAYVPVE WHLFWQPAD
|
|---|
| |